Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein, partial [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene956 SustainPine v3.0 1092
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RFB6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene50217 SustainPine v3.0 360
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820 gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285) [Arabidopsis thaliana] g 6.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein At1g09820 8.772e-06
Internal
sp_v3.0_unigene57028 SustainPine v3.0 289
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400 dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana] gb|AED97462.1| pentatricopeptide 5.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene62875 SustainPine v3.0 197
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12775, mitochondrial; Flags: Precursor gb|AAF78482.1|AC012187_2 Contains similarity to an unknown prot 1.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene81798 SustainPine v3.0 225
• AutoFact: Pentatricopeptide repeat protein n=1 Tax=Gossypium hirsutum RepID=D2STF0_GOSHI 2.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene98613 SustainPine v3.0 409
• AutoFact: Pentatricopeptide (PPR) repeat-containing protein n=1 Tax=Arabidopsis thaliana RepID=D4I6L6_ARATH 2.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 2.028e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain