Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: copalyl diphosphate synthase [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene2998 SustainPine v3.0 2704
AutoFact: Levopimaradiene synthase, chloroplastic n=2 Tax=Pinus RepID=TPSD1_PINTA 0.0
FL-Next: sp=Levopimaradiene synthase, chloroplastic; Pinus taeda (Loblolly pine). 0.0
Sma3: Copalyl diphosphate synthase 2.891e-34
Complete
sp_v3.0_unigene9633 SustainPine v3.0 2739
AutoFact: Isopimaradiene synthase, chloroplastic n=6 Tax=Picea RepID=TPSD2_PICAB 0.0
FL-Next: sp=Levopimaradiene synthase, chloroplastic; Pinus taeda (Loblolly pine). 0.0
Sma3: Copalyl diphosphate synthase 3.723e-33
Complete
sp_v3.0_unigene21053 SustainPine v3.0 1688
AutoFact: Isopimaradiene synthase, chloroplastic n=6 Tax=Picea RepID=TPSD2_PICAB 0.0
FL-Next: sp=Levopimaradiene synthase, chloroplastic; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Copalyl diphosphate synthase 2.559e-29
C-terminus
sp_v3.0_unigene34798 SustainPine v3.0 873
AutoFact: Isopimaradiene synthase, chloroplastic n=6 Tax=Picea RepID=TPSD2_PICAB 0.0
FL-Next: sp=Isopimaradiene synthase, chloroplastic; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Copalyl diphosphate synthase 2.72006e-41
Internal
sp_v3.0_unigene53198 SustainPine v3.0 187
AutoFact: Ent-copalyl diphosphate synthase n=3 Tax=Picea RepID=D2X8G0_PICGL 2.0e-28
FL-Next: tr=Ent-copalyl diphosphate synthase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Ent-copalyl diphosphate synthase 1.417e-25
Internal
sp_v3.0_unigene78006 SustainPine v3.0 291
AutoFact: E-beta farnesene synthase n=1 Tax=Pinus sylvestris RepID=D7PCH9_PINSY 0.0
FL-Next: tr=E-beta farnesene synthase; Pinus sylvestris (Scots pine). 0.0
Sma3: Longifolene synthase 1.949e-08
Internal
sp_v3.0_unigene97559 SustainPine v3.0 358
AutoFact: Abietadiene synthase, chloroplastic n=1 Tax=Abies grandis RepID=TPSDV_ABIGR 1.0e-39
FL-Next: sp=Abietadiene synthase, chloroplastic; Abies grandis (Grand fir). 0.0
Sma3: Copalyl diphosphate synthase 4.998e-25
Internal
sp_v3.0_unigene98930 SustainPine v3.0 523
AutoFact: Levopimaradiene synthase, chloroplastic n=2 Tax=Pinus RepID=TPSD1_PINTA 0.0
FL-Next: tr=Putative abietadiene synthase; Pinus densiflora (Japanese red pine). 0.0
Sma3: Copalyl diphosphate synthase 8.02e-36
Internal
sp_v3.0_unigene124824 SustainPine v3.0 300
AutoFact: Alpha-bisabolene synthase n=1 Tax=Abies grandis RepID=TPSD1_ABIGR 7.0e-36
FL-Next: sp=Alpha-bisabolene synthase; Abies grandis (Grand fir). 0.0
Sma3: Copalyl diphosphate synthase 8.491e-25
Internal
sp_v3.0_unigene131367 SustainPine v3.0 776
AutoFact: Levopimaradiene synthase, chloroplastic n=2 Tax=Pinus RepID=TPSD1_PINTA 0.0
FL-Next: sp=Levopimaradiene synthase, chloroplastic; Pinus taeda (Loblolly pine). 0.0
Sma3: Copalyl diphosphate synthase 1.208e-36
N-terminus
sp_v3.0_unigene135999 SustainPine v3.0 378
AutoFact: Isopimaradiene synthase, chloroplastic n=6 Tax=Picea RepID=TPSD2_PICAB 0.0
FL-Next: sp=Isopimaradiene synthase, chloroplastic; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Copalyl diphosphate synthase 4.975e-18
Internal
sp_v3.0_unigene136285 SustainPine v3.0 368
AutoFact: Abietadiene synthase, chloroplastic n=1 Tax=Abies grandis RepID=TPSDV_ABIGR 0.0
FL-Next: sp=Abietadiene synthase, chloroplastic; Abies grandis (Grand fir). 0.0
Sma3: Copalyl diphosphate synthase 5.811e-27
Internal
sp_v3.0_unigene165120 SustainPine v3.0 188
AutoFact: E-alpha-bisabolene synthase n=1 Tax=Picea abies RepID=Q675L6_PICAB 3.0e-28
FL-Next: tr=E-alpha-bisabolene synthase; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Copalyl diphosphate synthase 6.953e-32
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain