Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene28528 SustainPine v3.0 283
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Postia placenta Mad-698-R RepID=B8P336_POSPM 5.0e-22
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
Internal
sp_v3.0_unigene78269 SustainPine v3.0 171
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Chlorella variabilis RepID=E1ZAC3_9CHLO 9.0e-15
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
Internal
sp_v3.0_unigene152601 SustainPine v3.0 388
• AutoFact: 60S ribosomal protein L6 (Fragment) n=1 Tax=Chara globularis RepID=Q5KU23_CHAGO 6.0e-24
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
Internal
sp_v3.0_unigene156152 SustainPine v3.0 410
• AutoFact: 60s ribosomal protein l6 (Fragment) n=1 Tax=Pfiesteria piscicida RepID=E8Z656_PFIPI 4.0e-35
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
Internal
sp_v3.0_unigene156282 SustainPine v3.0 420
• AutoFact: 60s ribosomal protein l6 (Fragment) n=1 Tax=Pfiesteria piscicida RepID=E8Z656_PFIPI 3.0e-31
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
Internal
sp_v3.0_unigene156561 SustainPine v3.0 410
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Cyanophora paradoxa RepID=Q9SMI5_CYAPA 2.0e-33
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
Internal
sp_v3.0_unigene157986 SustainPine v3.0 180
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Cyanophora paradoxa RepID=Q9SMI5_CYAPA 1.0e-09
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene158491 SustainPine v3.0 528
• AutoFact: 60S ribosomal protein L6 (Fragment) n=1 Tax=Chara globularis RepID=Q5KU23_CHAGO 1.0e-29
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
Putative C-terminus
sp_v3.0_unigene166452 SustainPine v3.0 413
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Postia placenta Mad-698-R RepID=B8P336_POSPM 0.0
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 2.721e-38
N-terminus
sp_v3.0_unigene186063 SustainPine v3.0 444
• AutoFact: 60S ribosomal protein L6 n=8 Tax=Poaceae RepID=Q7XR19_ORYSJ 1.0e-32
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
Internal
sp_v3.0_unigene186080 SustainPine v3.0 481
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NXR6_COPC7 3.0e-22
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain