Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein, partial [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene19475 SustainPine v3.0 269
• AutoFact: NBS/LRR (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8J2_PINTA 3.0e-22
• FL-Next: sp=Probable disease resistance protein At5g66910; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: NBS/LRR 2.696e-09
Internal
sp_v3.0_unigene55989 SustainPine v3.0 247
• AutoFact: NBS-LRR disease resistance protein homologue n=2 Tax=Hordeum vulgare RepID=Q84KC6_HORVU 4.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene59089 SustainPine v3.0 278
• AutoFact: Putative TIR/NBS/LRR disease resistance protein (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I7_PINTA 5.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene63313 SustainPine v3.0 263
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene70404 SustainPine v3.0 206
• AutoFact: NBS/LRR (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8J2_PINTA 5.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene101801 SustainPine v3.0 478
• AutoFact: Putative TIR/NBS/LRR disease resistance protein (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I7_PINTA 4.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NBS/LRR 6.583e-10
Putative C-terminus
sp_v3.0_unigene127068 SustainPine v3.0 464
• AutoFact: NBS-LRR disease resistance protein homologue n=2 Tax=Hordeum vulgare RepID=Q84KC6_HORVU 5.0e-27
• FL-Next: sp=Probable disease resistance protein At5g66910; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene131064 SustainPine v3.0 467
• AutoFact: Putative TIR/NBS/LRR disease resistance protein (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I7_PINTA 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene132879 SustainPine v3.0 509
• AutoFact: NBS/LRR (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8J2_PINTA 9.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene137956 SustainPine v3.0 332
• AutoFact: NBS/LRR (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8J2_PINTA 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Disease resistance protein (TIR-NBS-LRR class), putative 3.464e-08
Internal
sp_v3.0_unigene161197 SustainPine v3.0 326
• AutoFact: NBS (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I9_PINTA 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene205379 SustainPine v3.0 267
• AutoFact: Disease resistance protein-like n=3 Tax=Arabidopsis thaliana RepID=Q9FI14_ARATH 6.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Disease resistance protein (TIR-NBS-LRR class), putative 1.676e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain