Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA methyltransferase [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene1838 SustainPine v3.0 4729
• AutoFact: Cytosine-specific methyltransferase n=1 Tax=Elaeis guineensis RepID=B4XTS8_ELAGV 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytosine-specific methyltransferase 0.0
Complete
sp_v3.0_unigene11790 SustainPine v3.0 1264
• AutoFact: Cytosine-specific methyltransferase n=2 Tax=Hieracium RepID=D0V1M9_HIEPL 0.0
• FL-Next: Isoform 3 of DNA (cytosine-5)-methyltransferase 1B OS=Oryza sativa subsp. japonica GN=MET1B 0.0
• Sma3: Cytosine-specific methyltransferase 0.0
C-terminus
sp_v3.0_unigene28819 SustainPine v3.0 539
• AutoFact: Cytosine-specific methyltransferase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TB44_VITVI 0.0
• FL-Next: Isoform 3 of DNA (cytosine-5)-methyltransferase 1B OS=Oryza sativa subsp. japonica GN=MET1B 0.0
• Sma3: Cytosine-specific methyltransferase 0.0
Internal
sp_v3.0_unigene35261 SustainPine v3.0 562
• AutoFact: Cytosine-specific methyltransferase n=2 Tax=Hieracium RepID=D0V1M9_HIEPL 0.0
• FL-Next: Isoform 3 of DNA (cytosine-5)-methyltransferase 1B OS=Oryza sativa subsp. japonica GN=MET1B 0.0
• Sma3: Cytosine-specific methyltransferase 0.0
Internal
sp_v3.0_unigene44054 SustainPine v3.0 747
• AutoFact: Cytosine-specific methyltransferase n=1 Tax=Ricinus communis RepID=B9RWB0_RICCO 0.0
• FL-Next: sp=DNA (cytosine-5)-methyltransferase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Cytosine-specific methyltransferase 0.0
Internal
sp_v3.0_unigene54569 SustainPine v3.0 223
• AutoFact: Cytosine-specific methyltransferase n=6 Tax=Nicotiana RepID=A0A9R7_TOBAC 2.0e-09
• FL-Next: sp=DNA (cytosine-5)-methyltransferase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Cytosine-specific methyltransferase 1.664e-18
Internal
sp_v3.0_unigene59314 SustainPine v3.0 257
• AutoFact: Cytosine-specific methyltransferase n=1 Tax=Selaginella moellendorffii RepID=D8RTV8_SELML 5.0e-16
• FL-Next: sp=DNA (cytosine-5)-methyltransferase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene63155 SustainPine v3.0 202
• AutoFact: Cytosine-specific methyltransferase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RVR7_PHYPA 7.0e-15
• FL-Next: sp=DNA (cytosine-5)-methyltransferase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Cytosine-specific methyltransferase 0.0
Internal
sp_v3.0_unigene64898 SustainPine v3.0 246
• AutoFact: Cytosine-specific methyltransferase n=2 Tax=Fragaria x ananassa RepID=C4P086_FRAAN 6.0e-14
• FL-Next: sp=DNA (cytosine-5)-methyltransferase 1B; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene76169 SustainPine v3.0 213
• AutoFact: Cytosine-specific methyltransferase n=1 Tax=Ricinus communis RepID=B9SPD5_RICCO 1.0e-15
• FL-Next: sp=DNA (cytosine-5)-methyltransferase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Cytosine-specific methyltransferase 0.0
Internal
sp_v3.0_unigene79394 SustainPine v3.0 281
• AutoFact: Cytosine-specific methyltransferase n=1 Tax=Prunus persica RepID=Q6YL54_PRUPE 3.0e-17
• FL-Next: sp=DNA (cytosine-5)-methyltransferase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene81408 SustainPine v3.0 205
• AutoFact: Cytosine-specific methyltransferase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RVR7_PHYPA 1.0e-20
• FL-Next: Isoform 3 of DNA (cytosine-5)-methyltransferase 1B OS=Oryza sativa subsp. japonica GN=MET1B 0.0
• Sma3: Cytosine-specific methyltransferase 0.0
Internal
sp_v3.0_unigene97781 SustainPine v3.0 220
• AutoFact: Cytosine-specific methyltransferase n=6 Tax=Nicotiana RepID=A0A9R7_TOBAC 5.0e-26
• FL-Next: Isoform 3 of DNA (cytosine-5)-methyltransferase 1B OS=Oryza sativa subsp. japonica GN=MET1B 0.0
• Sma3: Cytosine-specific methyltransferase 0.0
Internal
sp_v3.0_unigene115554 SustainPine v3.0 228
• AutoFact: Cytosine-specific methyltransferase n=1 Tax=Ricinus communis RepID=B9SPD5_RICCO 3.0e-28
• FL-Next: Isoform 2 of DNA (cytosine-5)-methyltransferase 1A OS=Oryza sativa subsp. japonica GN=MET1A 0.0
• Sma3: Cytosine-specific methyltransferase 0.0
Internal
sp_v3.0_unigene115943 SustainPine v3.0 538
• AutoFact: Cytosine-specific methyltransferase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TB45_VITVI 1.0e-23
• FL-Next: Isoform 3 of DNA (cytosine-5)-methyltransferase 1B OS=Oryza sativa subsp. japonica GN=MET1B 0.0
• Sma3: DNA methyltransferase 4.947e-08
Internal
sp_v3.0_unigene138959 SustainPine v3.0 274
• AutoFact: DNA (cytosine-5)-methyltransferase 1 n=3 Tax=Arabidopsis RepID=DNMT1_ARATH 3.0e-35
• FL-Next: sp=DNA (cytosine-5)-methyltransferase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Cytosine-specific methyltransferase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain