Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene40372 SustainPine v3.0 248
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q8S8P6.1|PP180_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32630 gb|AAM14987.1| putative salt-inducible protein [Arabidopsis thaliana] gb|AEC08707.1| pentatricop 9.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene44847 SustainPine v3.0 478
AutoFact: pfam12854, PPR_1, PPR repeat 3.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 2.919e-06
Putative C-terminus
sp_v3.0_unigene53089 SustainPine v3.0 323
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745 dbj|BAB11377.1| unnamed protein product [Arabidopsi 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene55942 SustainPine v3.0 229
AutoFact: pfam12854, PPR_1, PPR repeat 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene59259 SustainPine v3.0 212
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9S2E8_RICCO 8.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene63126 SustainPine v3.0 235
AutoFact: pfam12854, PPR_1, PPR repeat 2.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene64695 SustainPine v3.0 185
AutoFact: pentatricopeptide repeat-containing protein [Raphanus sativus] 4.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: cDNA clone:J033037I20, full insert sequence 9.26e-06
Internal
sp_v3.0_unigene72184 SustainPine v3.0 280
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9S2E8_RICCO 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene75183 SustainPine v3.0 211
AutoFact: pfam01535, PPR, PPR repeat 4.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene75337 SustainPine v3.0 277
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61990, mitochondrial; Flags: Precursor dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana] 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene77657 SustainPine v3.0 278
AutoFact: pfam12854, PPR_1, PPR repeat 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene118767 SustainPine v3.0 189
AutoFact: UDP-glucoronosyl/UDP-glucosyl transferase family protein 6.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene119984 SustainPine v3.0 203
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9S789_RICCO 6.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene127682 SustainPine v3.0 272
AutoFact: putative pentatricopeptide repeat-containing protein [Oryza sativa Japonica Group] 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain