Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene20182 SustainPine v3.0 1712
AutoFact: Rop4 small GTP binding protein n=8 Tax=Embryophyta RepID=Q9XF08_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Small rho-1 GTP-binding protein 0.0
Complete
sp_v3.0_unigene26372 SustainPine v3.0 424
AutoFact: Rac2 protein n=1 Tax=Ciona intestinalis RepID=Q7YT78_CIOIN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative rac protein 2.536e-17
N-terminus
sp_v3.0_unigene31798 SustainPine v3.0 412
AutoFact: Small GTPase Rac protein 43 n=2 Tax=Monosiga ovata RepID=D4QB73_9EUKA 2.94273e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative rac protein 2.324e-17
N-terminus
sp_v3.0_unigene34107 SustainPine v3.0 1237
AutoFact: Rac-like GTP-binding protein 7 n=5 Tax=Embryophyta RepID=RAC7_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene37710 SustainPine v3.0 1409
AutoFact: Rac-like GTP-binding protein 7 n=5 Tax=Embryophyta RepID=RAC7_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene40408 SustainPine v3.0 1802
AutoFact: Rac-like GTP-binding protein 7 n=5 Tax=Embryophyta RepID=RAC7_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Small rho-1 GTP-binding protein 0.0
Complete
sp_v3.0_unigene127526 SustainPine v3.0 1700
AutoFact: Rop4 small GTP binding protein n=8 Tax=Embryophyta RepID=Q9XF08_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Small rho-1 GTP-binding protein 0.0
Complete
sp_v3.0_unigene152591 SustainPine v3.0 319
AutoFact: Rho GTPase [Cryptococcus neoformans var. neoformans JEC21] gb|AAW46874.1| Rho GTPase, putative [Cryptococcus neoformans var. neoformans JEC21] 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene152746 SustainPine v3.0 313
AutoFact: ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3) [Xenopus (Silurana) tropicalis] gb|AAI35752.1| rac3 protein [Xenopus (Silurana) tropicalis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative rac protein 2.667e-17
Putative N-terminus
sp_v3.0_unigene155460 SustainPine v3.0 406
AutoFact: pfam00071, Ras, Ras family 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative rac protein 2.575e-17
Putative N-terminus
sp_v3.0_unigene156938 SustainPine v3.0 229
AutoFact: PREDICTED: similar to Rac1 protein n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000587F46 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene157402 SustainPine v3.0 414
AutoFact: Small GTPase Rac protein 43 n=2 Tax=Monosiga ovata RepID=D4QB73_9EUKA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative rac protein 2.324e-17
N-terminus
sp_v3.0_unigene158468 SustainPine v3.0 177
AutoFact: Rho GTPase n=2 Tax=Dictyosteliida RepID=D3B2K1_POLPA 8.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative rac protein 1.872e-17
Internal
sp_v3.0_unigene205664 SustainPine v3.0 495
AutoFact: Rho GTPase n=1 Tax=Polysphondylium pallidum RepID=D3BBX9_POLPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative rac protein 2.218e-17
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain