Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene30373 SustainPine v3.0 3681
AutoFact: structural maintenance of chromosomes 5 [Arabidopsis thaliana] emb|CAC01791.1| putative protein [Arabidopsis thaliana] gb|AED92224.1| structural maintenance of chromosomes 5 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene131972 SustainPine v3.0 214
AutoFact: structural maintenance of chromosomes 5 [Arabidopsis thaliana] emb|CAC01791.1| putative protein [Arabidopsis thaliana] gb|AED92224.1| structural maintenance of chromosomes 5 [Arabidopsis thaliana] 3.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene157501 SustainPine v3.0 478
AutoFact: PREDICTED: similar to U1 small nuclear ribonucleoprotein 1C n=1 Tax=Ornithorhynchus anatinus RepID=UPI0001554AF4 7.0e-37
FL-Next: sp=Structural maintenance of chromosomes protein 2-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative N-terminus
sp_v3.0_unigene167007 SustainPine v3.0 314
AutoFact: nucleus protein [Cryptococcus neoformans var. neoformans JEC21] ref|XP_776185.1| hypothetical protein CNBD0060 [Cryptococcus neoformans var. neoformans B-3501A] gb|EAL21538.1| hypothetical protein CNBD0060 [Cryptococcus neoformans var. neoformans B-3501A] 5.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene192990 SustainPine v3.0 426
AutoFact: Structural maintenance of chromosomes 5 smc5, putative n=1 Tax=Ricinus communis RepID=B9RVK1_RICCO 4.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene205757 SustainPine v3.0 622
AutoFact: structural maintenance of chromosomes 5 [Arabidopsis thaliana] emb|CAC01791.1| putative protein [Arabidopsis thaliana] gb|AED92224.1| structural maintenance of chromosomes 5 [Arabidopsis thaliana] 2.00386e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene206345 SustainPine v3.0 445
AutoFact: structural maintenance of chromosomes 5 [Arabidopsis thaliana] emb|CAC01791.1| putative protein [Arabidopsis thaliana] gb|AED92224.1| structural maintenance of chromosomes 5 [Arabidopsis thaliana] 6.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain