Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene2063 SustainPine v3.0 5319
AutoFact: ubiquitin-protein ligase 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: E3 ubiquitin protein ligase upl2, putative 1.42e-08
Putative Complete
sp_v3.0_unigene5594 SustainPine v3.0 1904
AutoFact: Contains similarity to ubiquitin carboxyl-terminal hydrolase 14 gb|Z35927 from S. cerevisiae [Arabidopsis thaliana] 0.0
FL-Next: sp=E3 ubiquitin-protein ligase UPL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: E3 ubiquitin protein ligase upl2, putative 6.584e-09
Internal
sp_v3.0_unigene5612 SustainPine v3.0 3082
AutoFact: putative ubiquitin-protein ligase 1 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: E3 ubiquitin protein ligase upl2, putative 1.895e-08
C-terminus
sp_v3.0_unigene6395 SustainPine v3.0 1549
AutoFact: ubiquitin-protein ligase 1 [Arabidopsis thaliana] 0.0
FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: E3 ubiquitin protein ligase upl2, putative 6.271e-09
Internal
sp_v3.0_unigene14952 SustainPine v3.0 363
AutoFact: PREDICTED: similar to E3 ubiquitin-protein ligase UPL1 n=1 Tax=Vitis vinifera RepID=UPI00019857DB 4.0e-27
FL-Next: sp=E3 ubiquitin-protein ligase UPL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene28305 SustainPine v3.0 838
AutoFact: PREDICTED: similar to E3 ubiquitin-protein ligase UPL1 n=1 Tax=Vitis vinifera RepID=UPI00019857DB 0.0
FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene37105 SustainPine v3.0 292
AutoFact: PREDICTED: similar to E3 ubiquitin-protein ligase UPL1 n=1 Tax=Vitis vinifera RepID=UPI00019857DB 6.0e-28
FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: E3 ubiquitin protein ligase upl2, putative 5.891e-09
Internal
sp_v3.0_unigene41167 SustainPine v3.0 640
AutoFact: Contains similarity to ubiquitin carboxyl-terminal hydrolase 14 gb|Z35927 from S. cerevisiae [Arabidopsis thaliana] 1.0e-22
FL-Next: sp=E3 ubiquitin-protein ligase UPL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: E3 ubiquitin protein ligase upl2, putative 1.577e-09
N-terminus
sp_v3.0_unigene53594 SustainPine v3.0 388
AutoFact: PREDICTED: similar to E3 ubiquitin-protein ligase UPL1 n=1 Tax=Vitis vinifera RepID=UPI00019857DB 2.0e-34
FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene61208 SustainPine v3.0 232
AutoFact: Ubiquitin-protein ligase, UPL1 n=2 Tax=Selaginella moellendorffii RepID=D8T159_SELML 5.0e-12
FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene63019 SustainPine v3.0 235
AutoFact: E3 ubiquitin protein ligase upl2, putative n=1 Tax=Ricinus communis RepID=B9S9V5_RICCO 3.0e-17
FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene77504 SustainPine v3.0 211
AutoFact: PREDICTED: similar to E3 ubiquitin-protein ligase UPL1 n=1 Tax=Vitis vinifera RepID=UPI00019857DB 4.0e-16
FL-Next: sp=E3 ubiquitin-protein ligase UPL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene104231 SustainPine v3.0 294
AutoFact: E3 ubiquitin protein ligase upl2, putative n=1 Tax=Ricinus communis RepID=B9S9V5_RICCO 6.0e-12
FL-Next: sp=E3 ubiquitin-protein ligase UPL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene109061 SustainPine v3.0 141
AutoFact: PREDICTED: similar to E3 ubiquitin-protein ligase UPL1 n=1 Tax=Vitis vinifera RepID=UPI00019857DB 5.0e-10
FL-Next: sp=E3 ubiquitin-protein ligase UPL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene111631 SustainPine v3.0 217
AutoFact: E3 ubiquitin-protein ligase UPL2 n=1 Tax=Arabidopsis thaliana RepID=UPL2_ARATH 3.0e-14
FL-Next: sp=E3 ubiquitin-protein ligase UPL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene114384 SustainPine v3.0 275
AutoFact: PREDICTED: similar to E3 ubiquitin-protein ligase UPL1 n=1 Tax=Vitis vinifera RepID=UPI00019857DB 1.0e-17
FL-Next: sp=E3 ubiquitin-protein ligase UPL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene119349 SustainPine v3.0 281
AutoFact: ubiquitin-protein ligase 2 [Arabidopsis thaliana] 3.0e-10
FL-Next: sp=E3 ubiquitin-protein ligase UPL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene150107 SustainPine v3.0 385
AutoFact: probable Nedd4 family E3 ubiquitin ligase [Candida albicans SC5314] ref|XP_714470.1| probable Nedd4 family E3 ubiquitin ligase [Candida albicans SC5314] gb|EAK95408.1| probable Nedd4 family E3 ubiquitin ligase [Candida albicans SC5314] gb|EAK95463.1| prob 7.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: E3 ubiquitin protein ligase upl2, putative 5.523e-09
C-terminus
sp_v3.0_unigene150230 SustainPine v3.0 385
AutoFact: PREDICTED: similar to HECT, UBA and WWE domain containing 1 n=1 Tax=Hydra magnipapillata RepID=UPI000192598E 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: E3 ubiquitin protein ligase upl2, putative 1.208e-08
Internal
sp_v3.0_unigene151351 SustainPine v3.0 259
AutoFact: Ubiquitin-protein ligase 1, putative n=1 Tax=Theileria annulata RepID=Q4UGH0_THEAN 7.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: E3 ubiquitin protein ligase upl2, putative 9.453e-09
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain