Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene4567 SustainPine v3.0 597
• AutoFact: Methyltransf_15 multi-domain protein 1.99993e-41
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
C-terminus
sp_v3.0_unigene27055 SustainPine v3.0 474
• AutoFact: SAM (and some other nucleotide) binding motif; WW/Rsp5/WWP [Medicago truncatula] 4.0e-23
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative N-terminus
sp_v3.0_unigene63951 SustainPine v3.0 190
• AutoFact: WW domain-containing protein (Fragment) n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7KPT9_ARALL 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene72894 SustainPine v3.0 248
• AutoFact: S-adenosyl-L-methionine-dependent methyltransferase domain-containing protein [Arabidopsis thaliana] gb|AAF19758.1|AC009917_17 Contains similarity to gi|629253 lmbW protein from Streptomyces lincolnensis [Arabidopsis thaliana] gb|AEE31242.1| S-adenosyl-L- 5.0e-13
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Putative C-terminus
sp_v3.0_unigene107312 SustainPine v3.0 176
• AutoFact: Os03g0396900 protein n=3 Tax=Oryza sativa RepID=Q94LF9_ORYSJ 3.0e-20
• FL-Next: tr=Os03g0396900 protein; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene128837 SustainPine v3.0 399
• AutoFact: S-adenosylmethionine-dependent methyltransferase domain-containing protein n=1 Tax=Arabidopsis thaliana RepID=F4HRC0_ARATH 8.0e-33
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
C-terminus
sp_v3.0_unigene148072 SustainPine v3.0 304
• AutoFact: S-adenosyl-L-methionine-dependent methyltransferase domain-containing protein [Arabidopsis thaliana] gb|AAF19758.1|AC009917_17 Contains similarity to gi|629253 lmbW protein from Streptomyces lincolnensis [Arabidopsis thaliana] gb|AEE31242.1| S-adenosyl-L- 7.0e-08
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
C-terminus
sp_v3.0_unigene187101 SustainPine v3.0 555
• AutoFact: WW domain-containing protein (Fragment) n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7KPT9_ARALL 4.0e-29
• FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain