Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene435 SustainPine v3.0 1536
AutoFact: Proteasome subunit alpha type n=3 Tax=Picea sitchensis RepID=A9NWU0_PICSI 0.0
FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene142920 SustainPine v3.0 282
AutoFact: Proteasome subunit alpha type n=3 Tax=Picea sitchensis RepID=A9NWU0_PICSI 6.0e-21
FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasome subunit alpha type 3.058e-23
Internal
sp_v3.0_unigene156868 SustainPine v3.0 436
AutoFact: 20S proteasome subunit C2 n=1 Tax=Dictyostelium fasciculatum RepID=F4PYC7_9MYCE 7.0e-34
FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasome subunit alpha type 3.37e-20
Putative C-terminus
sp_v3.0_unigene158501 SustainPine v3.0 371
AutoFact: Proteasome subunit alpha type n=1 Tax=Ectocarpus siliculosus RepID=D8LID9_ECTSI 7.0e-34
FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasome subunit alpha type 4.826e-20
Putative C-terminus
sp_v3.0_unigene159171 SustainPine v3.0 321
AutoFact: Proteasome subunit alpha type n=1 Tax=Polysphondylium pallidum RepID=D3BHC9_POLPA 2.0e-18
FL-Next: sp=Proteasome subunit alpha type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasome subunit alpha type 2.098e-39
N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain