Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: actin 5 [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene55385 SustainPine v3.0 463
AutoFact: Actin, putative n=1 Tax=Ricinus communis RepID=B9SXZ4_RICCO 4.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 2.626e-24
C-terminus
sp_v3.0_unigene60326 SustainPine v3.0 218
AutoFact: Actin (Fragment) n=1 Tax=Eimeria nieschulzi RepID=Q0Z8Q9_9EIME 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene61918 SustainPine v3.0 132
AutoFact: Putative actin n=1 Tax=Arabidopsis thaliana RepID=Q8GWA5_ARATH 6.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene80764 SustainPine v3.0 258
AutoFact: Actin-2 (Fragment) n=1 Tax=Ascaris suum RepID=F1LDN8_ASCSU 1.99993e-41
FL-Next: tr=Actin; Larix gmelinii. 0.0
Sma3: Beta-actin 3.593e-07
Internal
sp_v3.0_unigene81498 SustainPine v3.0 169
AutoFact: Actin (Fragment) n=1 Tax=Anopheles fluviatilis RepID=Q5EBS4_9DIPT 2.0e-24
FL-Next: tr=Actin 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Internal
sp_v3.0_unigene135976 SustainPine v3.0 461
AutoFact: Actin-2 (Fragment) n=1 Tax=Ascaris suum RepID=F1LCH5_ASCSU 0.0
FL-Next: tr=Actin 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Actin 1.671e-11
Internal
sp_v3.0_unigene144340 SustainPine v3.0 265
AutoFact: Actin, putative n=1 Tax=Ricinus communis RepID=B9SXZ4_RICCO 3.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 1.778e-27
C-terminus
sp_v3.0_unigene145871 SustainPine v3.0 371
AutoFact: Actin, putative n=1 Tax=Ricinus communis RepID=B9SXZ4_RICCO 2.0e-31
FL-Next: tr=Actin; Picea rubens (Red spruce) (Picea australis). 0.0
Sma3: Actin 2.087e-24
Putative C-terminus
sp_v3.0_unigene152733 SustainPine v3.0 475
AutoFact: Actin (Fragment) n=1 Tax=Enchytraeus japonensis RepID=B6RNM7_9ANNE 4.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 2.032e-32
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain