Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: predicted protein, partial [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene1989 SustainPine v3.0 2337
• AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9RDF9_RICCO 0.0
• FL-Next: sp=Outer row dynein assembly protein 16; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
Putative Complete
sp_v3.0_unigene39421 SustainPine v3.0 990
• AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9RDF9_RICCO 0.0
• FL-Next: tr=Nucleotide binding protein, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene58171 SustainPine v3.0 484
• AutoFact: BEACH domain-containing protein [Dictyostelium discoideum AX4] sp|Q54PP7.1|LVSF_DICDI RecName: Full=BEACH domain-containing protein lvsF gb|EAL65214.1| BEACH domain-containing protein [Dictyostelium discoideum AX4] 9.0e-28
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene64458 SustainPine v3.0 78
• AutoFact: beige-related and WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAC06163.1| unknown protein [Arabidopsis thaliana] gb|AEC10567.1| beige-related and WD-40 repeat-containing protein [Arabidopsis thaliana] 6.0e-07
• FL-Next: tr=Neurobeachin-like protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene75250 SustainPine v3.0 296
• AutoFact: beige-related and WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAC06163.1| unknown protein [Arabidopsis thaliana] gb|AEC10567.1| beige-related and WD-40 repeat-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene104505 SustainPine v3.0 216
• AutoFact: LvsF [Dictyostelium discoideum] 1.0e-21
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene124593 SustainPine v3.0 283
• AutoFact: pfam02138, Beach, Beige/BEACH domain 2.0e-13
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain