Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene36504 SustainPine v3.0 474
• AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SBS3_PHYPA 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pre-mRNA branch site p14-like protein 6.096e-09
Putative Complete
sp_v3.0_unigene47349 SustainPine v3.0 309
• AutoFact: Pre-mRNA branch site p14-like protein n=2 Tax=Arabidopsis RepID=PM14_ARATH 6.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pre-mRNA branch site p14-like protein 1.227e-09
N-terminus
sp_v3.0_unigene49019 SustainPine v3.0 146
• AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SBS3_PHYPA 3.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pre-mRNA branch site p14-like protein 2.356e-09
Internal
sp_v3.0_unigene126515 SustainPine v3.0 505
• AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SBS3_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
N-terminus
sp_v3.0_unigene153552 SustainPine v3.0 475
• AutoFact: Pre-mRNA branch site protein p14 n=23 Tax=Euteleostomi RepID=PM14_HUMAN 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pre-mRNA branch site p14-like protein 6.096e-09
Complete
sp_v3.0_unigene155756 SustainPine v3.0 425
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 6.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pre-mRNA branch site p14-like protein 6.096e-09
Complete
sp_v3.0_unigene158226 SustainPine v3.0 256
• AutoFact: pre-mRNA branch site protein p14 [Arabidopsis thaliana] ref|XP_002873554.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp. lyrata] sp|Q9FMP4.1|PM14_ARATH RecName: Full=Pre-mRNA branch site p14-like protein dbj|BAB10037.1| unnamed prot 7.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pre-mRNA branch site p14-like protein 6.096e-09
C-terminus
sp_v3.0_unigene190453 SustainPine v3.0 360
• AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SBS3_PHYPA 7.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pre-mRNA branch site p14-like protein 6.096e-09
N-terminus
sp_v3.0_unigene209706 SustainPine v3.0 511
• AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SBS3_PHYPA 2.8026e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain