Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene42762 SustainPine v3.0 144
AutoFact: DNA helicase: AAA ATPase [Psychrobacter arcticus 273-4] gb|AAZ19459.1| possible DNA helicase: AAA ATPase [Psychrobacter arcticus 273-4] 1.0e-09
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene52622 SustainPine v3.0 244
AutoFact: PREDICTED: ATP-dependent DNA helicase PIF1 [Monodelphis domestica] 4.0e-16
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Internal
sp_v3.0_unigene54394 SustainPine v3.0 230
AutoFact: PREDICTED: similar to PIF1 5-to-3 DNA helicase homolog n=1 Tax=Hydra magnipapillata RepID=UPI0001926F35 3.0e-15
FL-Next: tr=Singapore isolate B (sub-type 7) whole genome shotgun sequence assembly, scaffold_8; Blastocystis hominis. 0.0
Internal
sp_v3.0_unigene61411 SustainPine v3.0 100
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene74042 SustainPine v3.0 349
AutoFact: C. briggsae CBR-PIF-1 protein [Caenorhabditis briggsae] emb|CAP25664.1| CBR-PIF-1 protein [Caenorhabditis briggsae AF16] 3.0e-14
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene98435 SustainPine v3.0 371
AutoFact: RRM3/PIF1 helicase homolog [Schizosaccharomyces pombe] 1.0e-11
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene99274 SustainPine v3.0 323
AutoFact: RecName: Full=DNA repair and recombination protein PIF1; AltName: Full=ATP-dependent helicase PIF1; AltName: Full=Telomere stability protein 1; Flags: Precursor gb|EDN64334.1| 5'-3' DNA helicase [Saccharomyces cerevisiae YJM789] 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Putative C-terminus
sp_v3.0_unigene101267 SustainPine v3.0 529
AutoFact: RRM3/PIF1 helicase homolog [Schizosaccharomyces pombe] 4.0e-17
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene166548 SustainPine v3.0 360
AutoFact: DNA repair and recombination protein [Entamoeba histolytica HM-1:IMSS] gb|EAL43809.1| DNA repair and recombination protein, putative [Entamoeba histolytica HM-1:IMSS] 1.0e-10
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene184794 SustainPine v3.0 334
AutoFact: ATP-dependent DNA helicase PIF1 [Xenopus laevis] gb|AAH97805.2| MGC115521 protein [Xenopus laevis] 4.0e-18
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain