Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene21427 SustainPine v3.0 2420
• AutoFact: Elongation factor 1-alpha n=193 Tax=Eukaryota RepID=EF1A_ARATH 0.0
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Complete
sp_v3.0_unigene23433 SustainPine v3.0 762
• AutoFact: Elongation factor 1 alpha (Fragment) n=1 Tax=Cyclotella cryptica RepID=Q5EVA4_9STRA 0.0
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
C-terminus
sp_v3.0_unigene54377 SustainPine v3.0 478
• AutoFact: Translation elongation factor-1 alpha (Fragment) n=15 Tax=Dothideomycetes RepID=D3YFQ9_9PLEO 0.0
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 1.586e-39
Internal
sp_v3.0_unigene54453 SustainPine v3.0 342
• AutoFact: translation elongation factor-1 alpha [Picea abies] 7.0e-24
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 1.891e-16
Putative C-terminus
sp_v3.0_unigene59722 SustainPine v3.0 153
• AutoFact: Elongation factor 1-alpha (Fragment) n=1 Tax=Rimicaris exoculata RepID=D7F1R6_RIMEX 6.0e-19
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 7.337e-32
Internal
sp_v3.0_unigene60764 SustainPine v3.0 161
• AutoFact: Elongation factor 1-alpha n=1 Tax=Capsicum annuum RepID=Q9M516_CAPAN 4.0e-13
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 1.224e-36
Internal
sp_v3.0_unigene60766 SustainPine v3.0 129
• AutoFact: Elongation factor 1-alpha n=1 Tax=Capsicum annuum RepID=Q9M516_CAPAN 6.0e-11
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 4.146e-14
Internal
sp_v3.0_unigene60846 SustainPine v3.0 131
• AutoFact: Elongation factor 1-alpha (Fragment) n=1 Tax=Rimicaris exoculata RepID=D7F1R6_RIMEX 1.0e-10
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 2.148e-21
Internal
sp_v3.0_unigene61318 SustainPine v3.0 256
• AutoFact: Elongation factor 1 alpha (Fragment) n=1 Tax=Cynara cardunculus var. scolymus RepID=D2CP31_CYNSC 9.0e-17
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1.501e-07
Internal
sp_v3.0_unigene63671 SustainPine v3.0 315
• AutoFact: Elongation factor-1 alpha (Fragment) n=1 Tax=Dysmachus trigonus RepID=B3FBK4_9MUSC 0.0
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 7.191e-36
Internal
sp_v3.0_unigene64614 SustainPine v3.0 200
• AutoFact: Elongation factor 1-alpha n=1 Tax=Loa loa RepID=E1FZJ2_LOALO 1.0e-20
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 1.282e-36
Internal
sp_v3.0_unigene65332 SustainPine v3.0 187
• AutoFact: translation elongation factor-1 alpha [Picea abies] 1.0e-17
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 2.002e-21
Internal
sp_v3.0_unigene65498 SustainPine v3.0 226
• AutoFact: Elongation factor 1-alpha, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9TK78_RICCO 5.0e-26
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 1.615e-33
Internal
sp_v3.0_unigene65867 SustainPine v3.0 191
• AutoFact: Elongation factor 1-alpha n=1 Tax=Capsicum annuum RepID=Q9M516_CAPAN 2.0e-26
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 3.026e-36
Internal
sp_v3.0_unigene73665 SustainPine v3.0 319
• AutoFact: Translation elongation factor 1-alpha (Fragment) n=1 Tax=Macrolepiota mastoidea RepID=F1B353_9AGAR 4.0e-39
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 2.716e-33
Internal
sp_v3.0_unigene74031 SustainPine v3.0 226
• AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 9.0e-16
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 1.8e-28
Misassembled
sp_v3.0_unigene74555 SustainPine v3.0 379
• AutoFact: translation elongation factor-1 alpha [Picea abies] 0.0
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 5.3936e-42
Internal
sp_v3.0_unigene80901 SustainPine v3.0 197
• AutoFact: Elongation factor 1-alpha n=193 Tax=Eukaryota RepID=EF1A_ARATH 4.0e-11
• FL-Next: sp=Elongation factor 1-alpha 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Translation elongation factor-1 alpha 8.356e-07
Internal
sp_v3.0_unigene81451 SustainPine v3.0 186
• AutoFact: Elongation factor-1 alpha (Fragment) n=11 Tax=Triaenonychidae RepID=D7RGG5_9ARAC 5.0e-27
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Internal
sp_v3.0_unigene121393 SustainPine v3.0 166
• AutoFact: Elongation factor 1-alpha, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9TK78_RICCO 3.0e-17
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 4.636e-34
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain