Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: histone 2, partial [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene1708 SustainPine v3.0 889
• AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NXR7_PICSI 5.00264e-43
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene4454 SustainPine v3.0 887
• AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 2.0e-32
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene11880 SustainPine v3.0 847
• AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 3.0e-35
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene12111 SustainPine v3.0 1068
• AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NXR7_PICSI 1.99993e-41
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene18225 SustainPine v3.0 1076
• AutoFact: Histone H2A n=2 Tax=Picea sitchensis RepID=A9NQY2_PICSI 7.0e-32
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene31656 SustainPine v3.0 517
• AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NXR7_PICSI 5.04467e-44
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene67293 SustainPine v3.0 289
• AutoFact: Histone H2A n=1 Tax=Sorghum bicolor RepID=C5YYL4_SORBI 1.0e-13
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2A 0.0
Putative N-terminus
sp_v3.0_unigene128023 SustainPine v3.0 400
• AutoFact: Histone H2A n=1 Tax=Sorghum bicolor RepID=C5YYL4_SORBI 2.0e-25
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2A 0.0
N-terminus
sp_v3.0_unigene128204 SustainPine v3.0 495
• AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NXR7_PICSI 1.0e-24
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2A 0.0
C-terminus
sp_v3.0_unigene155885 SustainPine v3.0 290
• AutoFact: Histone H2A n=1 Tax=Trichinella spiralis RepID=E5RYR8_TRISP 2.0e-30
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2A 0.0
N-terminus
sp_v3.0_unigene166267 SustainPine v3.0 294
• AutoFact: Histone H2A n=1 Tax=Sorghum bicolor RepID=C5YYL4_SORBI 1.0e-15
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2A 0.0
N-terminus
sp_v3.0_unigene166820 SustainPine v3.0 345
• AutoFact: histone H2A [Hyacinthus orientalis] 2.0e-22
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2A 0.0
C-terminus
sp_v3.0_unigene186144 SustainPine v3.0 490
• AutoFact: Histone H2A n=3 Tax=Eukaryota RepID=Q8GUH3_ARATH 0.0
• FL-Next: sp=Histone H2A; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Histone H2A 0.0
Complete
sp_v3.0_unigene192348 SustainPine v3.0 298
• AutoFact: Histone H2A, orphon n=108 Tax=Bilateria RepID=H2AO_CHITH 2.0e-23
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2A 0.0
Putative N-terminus
sp_v3.0_unigene205429 SustainPine v3.0 478
• AutoFact: Histone H2A (Fragment) n=3 Tax=Adineta vaga RepID=B5LNF8_ADIVA 0.0
• FL-Next: sp=Histone H2A; Pinus taeda (Loblolly pine). 0.0
• Sma3: Histone H2A 0.0
Putative Complete
sp_v3.0_unigene209756 SustainPine v3.0 194
• AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 6.0e-11
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H2A 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain