Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: actin 2 [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene8765 SustainPine v3.0 1483
AutoFact: Actin-11 n=180 Tax=Spermatophyta RepID=ACT11_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 1.03e-30
Complete
sp_v3.0_unigene12961 SustainPine v3.0 865
AutoFact: Actin-75 n=1 Tax=Solanum tuberosum RepID=ACT7_SOLTU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 3.276e-32
C-terminus
sp_v3.0_unigene22332 SustainPine v3.0 1467
AutoFact: Actin-11 n=180 Tax=Spermatophyta RepID=ACT11_ARATH 0.0
FL-Next: tr=Actin 4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Actin 4.508e-31
C-terminus
sp_v3.0_unigene24039 SustainPine v3.0 1620
AutoFact: Actin-11 n=180 Tax=Spermatophyta RepID=ACT11_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene26334 SustainPine v3.0 367
AutoFact: actin [Amoeba proteus] 0.0
FL-Next: tr=Actin; Larix gmelinii. 0.0
Sma3: Actin 2.649e-26
N-terminus
sp_v3.0_unigene49487 SustainPine v3.0 472
AutoFact: Actin, putative n=1 Tax=Ricinus communis RepID=B9SXZ4_RICCO 6.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 2.21e-25
C-terminus
sp_v3.0_unigene51642 SustainPine v3.0 644
AutoFact: actin [Phalaenopsis hybrid cultivar] 0.0
FL-Next: tr=Actin; Picea rubens (Red spruce) (Picea australis). 0.0
Sma3: Actin 1.525e-16
N-terminus
sp_v3.0_unigene68456 SustainPine v3.0 174
AutoFact: Actin-11 n=180 Tax=Spermatophyta RepID=ACT11_ARATH 7.0e-10
FL-Next: tr=Actin; Picea rubens (Red spruce) (Picea australis). 0.0
Sma3: AT3G18780 protein 2.723e-08
Internal
sp_v3.0_unigene71532 SustainPine v3.0 345
AutoFact: Actin-1-like protein (Fragment) n=3 Tax=Spermatophyta RepID=D1MF42_SORBI 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 3.283e-27
C-terminus
sp_v3.0_unigene73954 SustainPine v3.0 490
AutoFact: Actin (Fragment) n=6 Tax=core eudicotyledons RepID=Q6PX70_CAPAN 2.0e-36
FL-Next: tr=Actin 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Actin-3 2.548e-07
Putative N-terminus
sp_v3.0_unigene75051 SustainPine v3.0 363
AutoFact: Actin, macronuclear n=3 Tax=Tetrahymena RepID=ACT1_TETTH 4.00001e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 1.778e-37
Internal
sp_v3.0_unigene76828 SustainPine v3.0 371
AutoFact: PREDICTED: similar to cytoplasmic beta-actin n=1 Tax=Canis lupus familiaris RepID=UPI00005A055D 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 6.779e-18
C-terminus
sp_v3.0_unigene77503 SustainPine v3.0 390
AutoFact: Actin (Fragment) n=30 Tax=Viridiplantae RepID=O48669_CUCSA 5.0e-35
FL-Next: tr=Actin; Larix gmelinii. 0.0
Sma3: Actin 1 2.605e-06
Internal
sp_v3.0_unigene79396 SustainPine v3.0 233
AutoFact: Actin (Fragment) n=20 Tax=Foraminifera RepID=Q9Y018_RETFI 7.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 1.025e-25
Putative N-terminus
sp_v3.0_unigene123570 SustainPine v3.0 310
AutoFact: Actin (Fragment) n=1 Tax=Hyaloraphidium curvatum RepID=D9I7S1_HYACU 0.0
FL-Next: tr=Actin; Larix gmelinii. 0.0
Sma3: Actin 5.261e-28
Internal
sp_v3.0_unigene133089 SustainPine v3.0 456
AutoFact: Actin (Fragment) n=4 Tax=Spermatophyta RepID=ACT_PINCO 9.80909e-45
FL-Next: tr=Uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: Actin 2.274e-22
Complete
sp_v3.0_unigene137955 SustainPine v3.0 343
AutoFact: actin 6.0e-26
FL-Next: tr=Actin; Larix gmelinii. 0.0
Sma3: Actin 2.469e-31
C-terminus
sp_v3.0_unigene138300 SustainPine v3.0 308
AutoFact: Actin-11 n=180 Tax=Spermatophyta RepID=ACT11_ARATH 3.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 5.283e-16
Putative C-terminus
sp_v3.0_unigene150365 SustainPine v3.0 354
AutoFact: Actin (Fragment) n=1 Tax=Enchytraeus japonensis RepID=B6RNM7_9ANNE 2.00386e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 1.084e-23
C-terminus
sp_v3.0_unigene151932 SustainPine v3.0 516
AutoFact: [Z] COG5277 Actin and related proteins 5.0e-28
FL-Next: tr=Actin; Picea rubens (Red spruce) (Picea australis). 0.0
Sma3: Actin 5.067e-16
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain