Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: actin 2 [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene152088 SustainPine v3.0 400
AutoFact: Actin, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5LNQ3_9ALVE 4.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 1.807e-30
C-terminus
sp_v3.0_unigene153713 SustainPine v3.0 443
AutoFact: Actin-like protein n=1 Tax=Phytophthora infestans T30-4 RepID=D0MYR6_PHYIT 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin superfamily 4.275e-11
C-terminus
sp_v3.0_unigene157104 SustainPine v3.0 128
AutoFact: Ubiquitin/actin fusion protein 3 (Fragment) n=1 Tax=Bigelowiella natans RepID=Q7XB27_BIGNA 1.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 9.676e-27
N-terminus
sp_v3.0_unigene158210 SustainPine v3.0 337
AutoFact: Actin, gamma 1 n=1 Tax=Pan troglodytes verus RepID=A5A6N1_PANTR 0.0
FL-Next: tr=Actin; Larix gmelinii. 0.0
Sma3: Actin 2.351e-19
N-terminus
sp_v3.0_unigene165389 SustainPine v3.0 170
AutoFact: Actin-2 n=10 Tax=Bilateria RepID=F1L3U5_ASCSU 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 3.694e-16
Putative C-terminus
sp_v3.0_unigene191058 SustainPine v3.0 309
AutoFact: Actin-17 n=1 Tax=Dictyostelium discoideum RepID=ACT17_DICDI 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 1.96901e-40
Putative C-terminus
sp_v3.0_unigene201810 SustainPine v3.0 315
AutoFact: Actin n=121 Tax=Cryptosporidium RepID=ACT_CRYPV 6.0e-17
FL-Next: tr=Actin; Larix gmelinii. 0.0
Sma3: Actin 2.374e-27
C-terminus
sp_v3.0_unigene205480 SustainPine v3.0 520
AutoFact: PREDICTED: similar to actin, beta, partial n=1 Tax=Pan troglodytes RepID=UPI0000E24C16 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 2.343e-22
C-terminus
sp_v3.0_unigene207797 SustainPine v3.0 528
AutoFact: Actin-11 n=180 Tax=Spermatophyta RepID=ACT11_ARATH 0.0
FL-Next: tr=Actin 4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Actin 2.031e-37
Putative C-terminus
sp_v3.0_unigene208538 SustainPine v3.0 318
AutoFact: Actin (Fragment) n=2 Tax=core eudicotyledons RepID=E3UU95_9ROSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin-like protein 9.763e-07
N-terminus
sp_v3.0_unigene210165 SustainPine v3.0 421
AutoFact: Actin (Fragment) n=4 Tax=Spermatophyta RepID=ACT_PINCO 0.0
FL-Next: tr=Uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: Actin 2.274e-22
Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain