Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein, partial [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene23628 SustainPine v3.0 656
• AutoFact: Putative ribosomal protein L17 (Fragment) n=1 Tax=Sipunculus nudus RepID=A8U9R6_SIPNU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L17 1.39e-10
Complete
sp_v3.0_unigene56376 SustainPine v3.0 487
• AutoFact: 60S ribosomal protein l17 n=1 Tax=Grosmannia clavigera kw1407 RepID=F0XM07_GROCL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L17-2 2.379e-08
N-terminus
sp_v3.0_unigene76324 SustainPine v3.0 203
• AutoFact: Putative 60S ribosomal protein RPL17 (Fragment) n=1 Tax=Flustra foliacea RepID=A9UDS6_9BILA 3.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L17-2 1.165e-08
Internal
sp_v3.0_unigene80319 SustainPine v3.0 427
• AutoFact: Ribosomal protein L17 n=2 Tax=Branchiostoma RepID=Q6WN59_BRABE 3.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L17-2 2.13e-08
C-terminus
sp_v3.0_unigene150566 SustainPine v3.0 318
• AutoFact: Ribosomal protein L17 (Fragment) n=1 Tax=Myxine glutinosa RepID=Q86LY9_MYXGL 5.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L17-2 2.145e-08
C-terminus
sp_v3.0_unigene150786 SustainPine v3.0 429
• AutoFact: Putative 60S ribosomal protein RPL17 n=1 Tax=Phoronis muelleri RepID=B2YI36_9BILA 1.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L17 1.39e-10
C-terminus
sp_v3.0_unigene151028 SustainPine v3.0 420
• AutoFact: PREDICTED: similar to ribosomal protein L17 isoform 1 n=2 Tax=Strongylocentrotus purpuratus RepID=UPI0000E45CC4 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L17 1.39e-10
C-terminus
sp_v3.0_unigene155437 SustainPine v3.0 152
• AutoFact: 60S ribosomal protein L17-2 [Arabidopsis thaliana] ref|XP_002887121.1| 60S ribosomal protein L17 [Arabidopsis lyrata subsp. lyrata] sp|P51413.2|RL172_ARATH RecName: Full=60S ribosomal protein L17-2 gb|AAC18792.1| Similar to ribosomal protein L17 gb|X62724 1.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L17-2 2.26e-08
Internal
sp_v3.0_unigene166192 SustainPine v3.0 180
• AutoFact: 60S ribosomal protein L17/L23 n=1 Tax=Postia placenta Mad-698-R RepID=B8NZF6_POSPM 8.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain