Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene11734 SustainPine v3.0 1501
• AutoFact: Lim domain protein n=2 Tax=Pinaceae RepID=F4MKL9_PINPS 0.0
• FL-Next: tr=Lim domain protein; Pinus pinaster (Maritime pine). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene21856 SustainPine v3.0 409
• AutoFact: LIM-type zinc finger-containing protein n=1 Tax=Polysphondylium pallidum RepID=D3AXP0_POLPA 4.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene23306 SustainPine v3.0 517
• AutoFact: LIM-type zinc finger-containing protein n=1 Tax=Dictyostelium fasciculatum RepID=F4Q264_9MYCE 2.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene23382 SustainPine v3.0 733
• AutoFact: LIM-type zinc finger-containing protein n=1 Tax=Dictyostelium fasciculatum RepID=F4Q264_9MYCE 1.0e-13
• FL-Next: tr=Lim domain protein; Pinus pinaster (Maritime pine). 0.0
• Sma3: LIM-domain SF3 protein 4.386e-06
Putative Complete
sp_v3.0_unigene30779 SustainPine v3.0 501
• AutoFact: LIM-type zinc finger-containing protein [Dictyostelium discoideum AX4] sp|O60952.1|LIME_DICDI RecName: Full=LIM domain-containing protein E; AltName: Full=DdLim gb|AAC05729.1| LIM domain protein [Dictyostelium discoideum] gb|EAL67646.1| LIM-type zinc fing 3.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene70750 SustainPine v3.0 440
• AutoFact: Lim domain protein n=2 Tax=Pinaceae RepID=F4MKL9_PINPS 8.0e-17
• FL-Next: tr=Lim domain protein; Pinus pinaster (Maritime pine). 0.0
Putative C-terminus
sp_v3.0_unigene142278 SustainPine v3.0 1050
• AutoFact: Lim domain protein n=2 Tax=Pinaceae RepID=F4MKL9_PINPS 0.0
• FL-Next: tr=Lim domain protein; Pinus pinaster (Maritime pine). 0.0
• Sma3: Putative uncharacterized protein 0.0
Putative Complete
sp_v3.0_unigene144594 SustainPine v3.0 657
• AutoFact: Lim domain protein n=2 Tax=Pinaceae RepID=F4MKL9_PINPS 3.0e-23
• FL-Next: tr=Lim domain protein; Pinus pinaster (Maritime pine). 0.0
• Sma3: Pollen-specific protein SF3, putative 2.573e-22
N-terminus
sp_v3.0_unigene152874 SustainPine v3.0 338
• AutoFact: PREDICTED: LIM domain-containing protein 2-like [Danio rerio] 3.0e-23
• FL-Next: tr=Lim domain protein; Pinus pinaster (Maritime pine). 0.0
Putative Complete
sp_v3.0_unigene154347 SustainPine v3.0 281
• AutoFact: LIM-type zinc finger-containing protein n=1 Tax=Polysphondylium pallidum RepID=D3B4V5_POLPA 9.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene154425 SustainPine v3.0 232
• AutoFact: LIM-type zinc finger-containing protein [Dictyostelium discoideum AX4] sp|O60952.1|LIME_DICDI RecName: Full=LIM domain-containing protein E; AltName: Full=DdLim gb|AAC05729.1| LIM domain protein [Dictyostelium discoideum] gb|EAL67646.1| LIM-type zinc fing 2.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene154807 SustainPine v3.0 486
• AutoFact: LIM-type zinc finger-containing protein n=1 Tax=Dictyostelium fasciculatum RepID=F4Q264_9MYCE 2.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene155564 SustainPine v3.0 345
• AutoFact: PREDICTED: similar to LIM and SH3 domain protein F42H10.3 [Tribolium castaneum] gb|EFA06590.1| hypothetical protein TcasGA2_TC009504 [Tribolium castaneum] 1.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene158352 SustainPine v3.0 242
• AutoFact: LIM-type zinc finger-containing protein [Dictyostelium discoideum AX4] sp|O60952.1|LIME_DICDI RecName: Full=LIM domain-containing protein E; AltName: Full=DdLim gb|AAC05729.1| LIM domain protein [Dictyostelium discoideum] gb|EAL67646.1| LIM-type zinc fing 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene158958 SustainPine v3.0 170
• AutoFact: LIM-type zinc finger-containing protein n=1 Tax=Dictyostelium fasciculatum RepID=F4Q264_9MYCE 4.0e-10
• FL-Next: tr=Lim domain protein; Pinus pinaster (Maritime pine). 0.0
• Sma3: LIM-domain SF3 protein 4.386e-06
Putative N-terminus
sp_v3.0_unigene159062 SustainPine v3.0 446
• AutoFact: LIM-type zinc finger-containing protein n=1 Tax=Dictyostelium fasciculatum RepID=F4Q264_9MYCE 4.0e-14
• FL-Next: tr=Lim domain protein; Pinus pinaster (Maritime pine). 0.0
• Sma3: LIM-domain SF3 protein 4.386e-06
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain