Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: actin 6 [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene4883 SustainPine v3.0 112
AutoFact: PREDICTED: actin, cytoplasmic 1-like n=1 Tax=Monodelphis domestica RepID=UPI00020F63EE 7.0e-08
FL-Next: tr=Actin; Picea rubens (Red spruce) (Picea australis). 0.0
Sma3: Actin 1 1.729e-06
Internal
sp_v3.0_unigene52100 SustainPine v3.0 377
AutoFact: Actin (Fragment) n=29 Tax=Spermatophyta RepID=A4UTT6_9POAL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 9.777e-09
Internal
sp_v3.0_unigene53090 SustainPine v3.0 326
AutoFact: Actin-18 n=1 Tax=Dictyostelium discoideum RepID=ACT18_DICDI 3.0e-33
FL-Next: tr=Actin 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Actin 2.326e-08
Internal
sp_v3.0_unigene55577 SustainPine v3.0 366
AutoFact: Actin-2 n=10 Tax=Bilateria RepID=F1L3U5_ASCSU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 1.115e-27
Internal
sp_v3.0_unigene63766 SustainPine v3.0 187
AutoFact: Actin (Fragment) n=1 Tax=Gladiolus hybrid cultivar RepID=Q6L655_9ASPA 9.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AT3G18780 protein 3.884e-08
Internal
sp_v3.0_unigene74838 SustainPine v3.0 269
AutoFact: Actin-like protein (Fragment) n=6 Tax=Magnoliophyta RepID=E5L4N8_ONCHC 4.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 1 2.228e-06
Internal
sp_v3.0_unigene80153 SustainPine v3.0 138
AutoFact: Probable centractin (Ro-4) n=2 Tax=Ustilaginaceae RepID=E6ZX53_9BASI 4.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene109017 SustainPine v3.0 169
AutoFact: Actin 5 (Fragment) n=1 Tax=Cycas revoluta RepID=O23776_CYCRE 9.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 5 2.864e-08
Internal
sp_v3.0_unigene145806 SustainPine v3.0 442
AutoFact: Actin-like protein (Fragment) n=6 Tax=Magnoliophyta RepID=E5L4N8_ONCHC 0.0
FL-Next: tr=Actin; Picea rubens (Red spruce) (Picea australis). 0.0
Sma3: Actin-2 1.064e-06
Internal
sp_v3.0_unigene145892 SustainPine v3.0 335
AutoFact: Actin (Fragment) n=1 Tax=Gladiolus hybrid cultivar RepID=Q6L655_9ASPA 3.0e-26
FL-Next: tr=Actin; Picea rubens (Red spruce) (Picea australis). 0.0
Sma3: Actin 3.637e-17
Internal
sp_v3.0_unigene146177 SustainPine v3.0 389
AutoFact: Actin (Fragment) n=2 Tax=core eudicotyledons RepID=E3UU95_9ROSI 6.02558e-44
FL-Next: tr=Actin; Picea rubens (Red spruce) (Picea australis). 0.0
Misassembled
sp_v3.0_unigene155448 SustainPine v3.0 452
AutoFact: Actin-1 n=121 Tax=root RepID=ACT1_PHYIN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 8.728e-38
Internal
sp_v3.0_unigene157097 SustainPine v3.0 295
AutoFact: Actin (Fragment) n=5 Tax=stramenopiles RepID=Q6JXH5_9STRA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 1.245e-35
Internal
sp_v3.0_unigene161531 SustainPine v3.0 422
AutoFact: Actin-like protein (Centractin) n=4 Tax=Hypocreales RepID=E9E4X9_METAQ 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin-2 5.895e-07
N-terminus
sp_v3.0_unigene168303 SustainPine v3.0 104
AutoFact: PREDICTED: actin, cytoplasmic 1-like n=1 Tax=Monodelphis domestica RepID=UPI00020F63EE 5.0e-10
FL-Next: tr=Actin; Picea rubens (Red spruce) (Picea australis). 0.0
Internal
sp_v3.0_unigene188857 SustainPine v3.0 626
AutoFact: Actin-2 n=10 Tax=Bilateria RepID=F1L3U5_ASCSU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 5.758e-28
C-terminus
sp_v3.0_unigene191377 SustainPine v3.0 224
AutoFact: Actin, putative n=2 Tax=Sarcocystidae RepID=B9PQT4_TOXGO 4.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 2.58e-31
C-terminus
sp_v3.0_unigene195793 SustainPine v3.0 243
AutoFact: Actin domain-containing protein n=1 Tax=Dictyostelium fasciculatum RepID=F4PJ18_9MYCE 5.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 5 3.851e-08
Internal
sp_v3.0_unigene202428 SustainPine v3.0 667
AutoFact: Actin-2 n=10 Tax=Bilateria RepID=F1L3U5_ASCSU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 4.969e-35
C-terminus
sp_v3.0_unigene206970 SustainPine v3.0 576
AutoFact: Actin-2 n=10 Tax=Bilateria RepID=F1L3U5_ASCSU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 2.386e-32
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain