Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: ABC transporter family protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene4396 SustainPine v3.0 354
AutoFact: Iron-inhibited ABC transporter (Fragment) n=3 Tax=Pinaceae RepID=C6F6D7_PSEMZ 6.99949e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ABC transporter family protein 9.84e-09
Internal
sp_v3.0_unigene20608 SustainPine v3.0 2464
AutoFact: ATP-binding cassette transporter [Pteris vittata] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene51433 SustainPine v3.0 924
AutoFact: Iron-inhibited ABC transporter (Fragment) n=3 Tax=Pinaceae RepID=C6F6D7_PSEMZ 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene55413 SustainPine v3.0 268
AutoFact: Iron-inhibited ABC transporter (Fragment) n=3 Tax=Pinaceae RepID=C6F6D7_PSEMZ 6.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ABC transporter family protein 2.333e-06
Internal
sp_v3.0_unigene62025 SustainPine v3.0 235
AutoFact: Iron-inhibited ABC transporter (Fragment) n=3 Tax=Pinaceae RepID=C6F6D7_PSEMZ 9.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ABC transporter family protein 2.1e-06
Internal
sp_v3.0_unigene63501 SustainPine v3.0 187
AutoFact: ATP-binding cassette sub-family f member 2 [Oryza sativa Indica Group] 3.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ABC transporter family protein 2.133e-06
Internal
sp_v3.0_unigene136011 SustainPine v3.0 245
AutoFact: ABC transporter homolog [Populus nigra] 9.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ABC transporter family protein 4.354e-06
Misassembled
sp_v3.0_unigene137151 SustainPine v3.0 230
AutoFact: ATP-binding cassette sub-family f member 2 [Oryza sativa Indica Group] 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-binding cassette superfamily 1.756e-09
Internal
sp_v3.0_unigene154079 SustainPine v3.0 251
AutoFact: PREDICTED: ATP-binding cassette sub-family F member 1-like isoform 1 [Apis mellifera] 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-dependent transporter, putative 1.082e-10
C-terminus
sp_v3.0_unigene192771 SustainPine v3.0 481
AutoFact: ATP-binding cassette, sub-family F, member 2-like [Danio rerio] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-binding cassette superfamily 1.732e-09
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain