Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene3311 SustainPine v3.0 1241
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Picea sitchensis RepID=A9NNE0_PICSI 0.0
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
Complete
sp_v3.0_unigene21899 SustainPine v3.0 717
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Monosiga brevicollis RepID=A9UQ35_MONBE 6.0e-35
• FL-Next: tr=Uncharacterized protein; Lotus japonicus (Lotus corniculatus var. japonicus). 0.0
• Sma3: 60S ribosomal protein L6 1.102e-39
Complete
sp_v3.0_unigene23619 SustainPine v3.0 826
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Schizophyllum commune H4-8 RepID=D8PPW2_SCHCM 0.0
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
Complete
sp_v3.0_unigene24008 SustainPine v3.0 1078
• AutoFact: 60S ribosomal protein L6 n=3 Tax=Picea sitchensis RepID=A9NLS7_PICSI 0.0
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
Complete
sp_v3.0_unigene25587 SustainPine v3.0 865
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Picea sitchensis RepID=A9NNE0_PICSI 1.0e-35
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
Putative Complete
sp_v3.0_unigene26180 SustainPine v3.0 354
• AutoFact: 60S ribosomal protein L6 n=3 Tax=Physcomitrella patens subsp. patens RepID=A9SVY4_PHYPA 9.0e-15
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
N-terminus
sp_v3.0_unigene26489 SustainPine v3.0 421
• AutoFact: 60S ribosomal protein L6 (Fragment) n=1 Tax=Thalassiosira pseudonana RepID=B8CBR7_THAPS 6.0e-38
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
Internal
sp_v3.0_unigene27652 SustainPine v3.0 616
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Schizophyllum commune H4-8 RepID=D8PPW2_SCHCM 1.96182e-44
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
C-terminus
sp_v3.0_unigene35839 SustainPine v3.0 620
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Schizophyllum commune H4-8 RepID=D8PPW2_SCHCM 9.99967e-42
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
C-terminus
sp_v3.0_unigene51700 SustainPine v3.0 394
• AutoFact: PREDICTED: 60S ribosomal protein L6-like n=1 Tax=Anolis carolinensis RepID=UPI000203A4D7 1.0e-36
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
C-terminus
sp_v3.0_unigene55855 SustainPine v3.0 332
• AutoFact: Ribosomal protein rpl6 n=1 Tax=Eurythoe complanata RepID=A8UFZ6_EURCO 9.94922e-44
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
Internal
sp_v3.0_unigene75725 SustainPine v3.0 200
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Monosiga brevicollis RepID=A9UQ35_MONBE 9.0e-16
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 2.344e-20
Internal
sp_v3.0_unigene118752 SustainPine v3.0 262
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0CYH9_LACBS 6.0e-26
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
Internal
sp_v3.0_unigene126742 SustainPine v3.0 1082
• AutoFact: 60S ribosomal protein L6 n=3 Tax=Picea sitchensis RepID=A9NLS7_PICSI 0.0
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
Complete
sp_v3.0_unigene140613 SustainPine v3.0 428
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Picea sitchensis RepID=A9NNE0_PICSI 1.00053e-42
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
N-terminus
sp_v3.0_unigene156072 SustainPine v3.0 318
• AutoFact: 60S ribosomal protein L6 putative n=1 Tax=Albugo laibachii Nc14 RepID=F0WZ30_9STRA 2.0e-28
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
Internal
sp_v3.0_unigene157495 SustainPine v3.0 256
• AutoFact: 60S ribosomal protein L6-1 n=8 Tax=Brassicaceae RepID=RL61_ARATH 4.0e-11
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene183244 SustainPine v3.0 431
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9BYQ8_9EUKA 4.0e-24
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
C-terminus
sp_v3.0_unigene184212 SustainPine v3.0 736
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Cyanophora paradoxa RepID=Q9SMI5_CYAPA 0.0
• FL-Next: sp=60S ribosomal protein L6; Cyanophora paradoxa. 0.0
• Sma3: 60S ribosomal protein L6 0.0
Complete
sp_v3.0_unigene184476 SustainPine v3.0 621
• AutoFact: 60S ribosomal protein L6 n=1 Tax=Mesembryanthemum crystallinum RepID=RL6_MESCR 5.60519e-45
• FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L6 0.0
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain