Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene4345 SustainPine v3.0 432
AutoFact: Chlorophyll a-b binding protein type 2 member 1A, chloroplastic n=37 Tax=Spermatophyta RepID=CB2A_PINSY 7.00649e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 7.519e-17
Putative Complete
sp_v3.0_unigene17343 SustainPine v3.0 1136
AutoFact: Chlorophyll a-b binding protein type 2 member 1A, chloroplastic n=37 Tax=Spermatophyta RepID=CB2A_PINSY 0.0
FL-Next: sp=Chlorophyll a-b binding protein type 2 member 1A, chloroplastic; Pinus sylvestris (Scots pine). 0.0
Sma3: LHCP 0.0
Complete
sp_v3.0_unigene33050 SustainPine v3.0 573
AutoFact: chlorophyll a/b-binding protein [Pinus thunbergii] 4.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 1.205e-18
Internal
sp_v3.0_unigene35822 SustainPine v3.0 447
AutoFact: Major light-harvesting chlorophyll a/b protein 3 n=1 Tax=Dunaliella salina RepID=A8BDJ0_DUNSA 2.0e-28
FL-Next: tr=Light harvesting chlorophyll a /b-binding protein Lhcb1*1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: LHCP 5.87985e-42
C-terminus
sp_v3.0_unigene51560 SustainPine v3.0 326
AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH 2.0e-10
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: Chlorophyll a-b binding protein of LHCII 1.762e-10
Putative N-terminus
sp_v3.0_unigene51951 SustainPine v3.0 344
AutoFact: Chlorophyll A-B binding protein (CAB), putative n=2 Tax=Magnoliophyta RepID=Q1EPK5_MUSAC 0.0
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: LHCP 4.147e-31
Internal
sp_v3.0_unigene53519 SustainPine v3.0 456
AutoFact: Chlorophyll a-b binding protein 2 n=1 Tax=Zea mays RepID=B6SZ08_MAIZE 0.0
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: LHCP 6.075e-29
Internal
sp_v3.0_unigene53724 SustainPine v3.0 396
AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=12 Tax=Pinaceae RepID=CB21_PINTH 4.0e-27
FL-Next: sp=Chlorophyll a-b binding protein type 2 member 1B, chloroplastic; Pinus sylvestris (Scots pine). 0.0
Sma3: LHCP 2.564e-25
Internal
sp_v3.0_unigene54346 SustainPine v3.0 451
AutoFact: Chlorophyll a-b binding protein type 2 member 1A, chloroplastic n=37 Tax=Spermatophyta RepID=CB2A_PINSY 6.99949e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 7.882e-20
Putative Complete
sp_v3.0_unigene54909 SustainPine v3.0 379
AutoFact: Chlorophyll a-b binding protein 151, chloroplastic n=18 Tax=Magnoliophyta RepID=CB21_GOSHI 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 2.01e-16
C-terminus
sp_v3.0_unigene55028 SustainPine v3.0 497
AutoFact: Chlorophyll A-B binding protein (CAB), putative n=2 Tax=Magnoliophyta RepID=Q1EPK5_MUSAC 0.0
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: LHCP 1.883e-29
C-terminus
sp_v3.0_unigene56905 SustainPine v3.0 415
AutoFact: Chlorophyll a-b binding protein 2 n=1 Tax=Zea mays RepID=B6SZ08_MAIZE 0.0
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: LHCP 6.372e-29
Internal
sp_v3.0_unigene58781 SustainPine v3.0 256
AutoFact: putative chlorophyll a/b binding protein [Triticum turgidum subsp. durum] 9.0e-35
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: LHCP 1.837e-21
Internal
sp_v3.0_unigene65571 SustainPine v3.0 231
AutoFact: Chloroplast light harvesting chlorophyll a/b binding protein (Fragment) n=7 Tax=Pinaceae RepID=Q4VV52_PINST 1.0e-31
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: LHCP 1.175e-33
Internal
sp_v3.0_unigene71907 SustainPine v3.0 376
AutoFact: Chlorophyll a-b binding protein 3C, chloroplastic n=40 Tax=Magnoliophyta RepID=CB2G_SOLLC 0.0
FL-Next: tr=Light-harvesting chlorophyll a/b-binding protein of photosystem II; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
Sma3: LHCP 2.645e-19
Internal
sp_v3.0_unigene71945 SustainPine v3.0 353
AutoFact: chloroplast chlorophyll a/b-binding protein [Agave tequilana] 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 8.372e-24
C-terminus
sp_v3.0_unigene73700 SustainPine v3.0 397
AutoFact: Chlorophyll A-B binding protein (CAB), putative n=2 Tax=Magnoliophyta RepID=Q1EPK5_MUSAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 2.242e-29
C-terminus
sp_v3.0_unigene73878 SustainPine v3.0 404
AutoFact: Chloroplast light harvesting chlorophyll a/b binding protein (Fragment) n=7 Tax=Pinaceae RepID=Q4VV52_PINST 2.0e-39
FL-Next: tr=Chlorophyll a/b binding protein; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
Sma3: LHCP 7.457e-27
Putative C-terminus
sp_v3.0_unigene74194 SustainPine v3.0 289
AutoFact: chloroplast chlorophyll a/b binding protein [Pachysandra terminalis] 1.0e-38
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: LHCP 1.736e-21
Internal
sp_v3.0_unigene74263 SustainPine v3.0 471
AutoFact: Chloroplast light harvesting chlorophyll a/b binding protein (Fragment) n=7 Tax=Pinaceae RepID=Q4VV52_PINST 9.99995e-41
FL-Next: tr=Chlorophyll a/b binding protein; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
Sma3: LHCP 1.743e-16
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain