Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene7126 SustainPine v3.0 1613
• AutoFact: PQ loop repeat-containing protein [Arabidopsis thaliana] gb|AAL86295.1| unknown protein [Arabidopsis thaliana] gb|AAM91683.1| unknown protein [Arabidopsis thaliana] gb|AEC09919.1| PQ loop repeat-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene8843 SustainPine v3.0 755
• AutoFact: PQ-loop repeat family protein / transmembrane family protein [Arabidopsis thaliana] gb|AAK76703.1| unknown protein [Arabidopsis thaliana] gb|AEE86709.1| PQ-loop repeat family protein / transmembrane family protein [Arabidopsis thaliana] 4.0e-33
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Putative N-terminus
sp_v3.0_unigene28223 SustainPine v3.0 704
• AutoFact: PQ-loop repeat family protein / transmembrane family protein [Arabidopsis thaliana] gb|AAK76703.1| unknown protein [Arabidopsis thaliana] gb|AEE86709.1| PQ-loop repeat family protein / transmembrane family protein [Arabidopsis thaliana] 4.0e-38
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene35031 SustainPine v3.0 839
• AutoFact: PQ-loop repeat family protein / transmembrane family protein [Arabidopsis thaliana] gb|AAK76703.1| unknown protein [Arabidopsis thaliana] gb|AEE86709.1| PQ-loop repeat family protein / transmembrane family protein [Arabidopsis thaliana] 2.0e-36
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene37644 SustainPine v3.0 1007
• AutoFact: PQ-loop repeat family protein / transmembrane family protein [Arabidopsis thaliana] gb|AAK76703.1| unknown protein [Arabidopsis thaliana] gb|AEE86709.1| PQ-loop repeat family protein / transmembrane family protein [Arabidopsis thaliana] 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Putative N-terminus
sp_v3.0_unigene40628 SustainPine v3.0 1578
• AutoFact: PQ loop repeat-containing protein [Arabidopsis thaliana] gb|AAL86295.1| unknown protein [Arabidopsis thaliana] gb|AAM91683.1| unknown protein [Arabidopsis thaliana] gb|AEC09919.1| PQ loop repeat-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative Complete
sp_v3.0_unigene43205 SustainPine v3.0 893
• AutoFact: PQ-loop repeat family protein / transmembrane family protein [Arabidopsis thaliana] gb|AAK76703.1| unknown protein [Arabidopsis thaliana] gb|AEE86709.1| PQ-loop repeat family protein / transmembrane family protein [Arabidopsis thaliana] 7.0e-38
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene46037 SustainPine v3.0 292
• AutoFact: PQ-loop repeat family protein / transmembrane family protein n=4 Tax=Arabidopsis RepID=Q94AH7_ARATH 3.0e-10
• FL-Next: tr=Membrane protein, putative; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene102615 SustainPine v3.0 506
• AutoFact: PQ-loop repeat family protein / transmembrane family protein [Arabidopsis thaliana] gb|AAK76703.1| unknown protein [Arabidopsis thaliana] gb|AEE86709.1| PQ-loop repeat family protein / transmembrane family protein [Arabidopsis thaliana] 6.0e-32
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
N-terminus
sp_v3.0_unigene140720 SustainPine v3.0 616
• AutoFact: putative PQ-loop repeat family protein [Prunus dulcis] 5.0e-31
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain