Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein, partial [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene9240 SustainPine v3.0 2426
AutoFact: DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RNX6_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-directed RNA polymerase 0.0
Complete
sp_v3.0_unigene46290 SustainPine v3.0 397
AutoFact: DNA-directed RNA polymerase n=1 Tax=Ricinus communis RepID=B9SHS2_RICCO 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA-directed RNA polymerase 7.672e-16
Internal
sp_v3.0_unigene48913 SustainPine v3.0 247
AutoFact: DNA-directed RNA polymerase n=2 Tax=Selaginella moellendorffii RepID=D8T979_SELML 5.0e-29
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB2; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Sma3: DNA-directed RNA polymerase 2.716e-13
Internal
sp_v3.0_unigene56778 SustainPine v3.0 330
AutoFact: DNA-directed RNA polymerase n=1 Tax=Selaginella moellendorffii RepID=D8S1N7_SELML 5.0e-39
FL-Next: sp=DNA-directed RNA polymerase; Selaginella moellendorffii (Spikemoss). 0.0
Sma3: DNA-directed RNA polymerase 9.633e-11
Internal
sp_v3.0_unigene62258 SustainPine v3.0 237
AutoFact: DNA-directed RNA polymerase n=2 Tax=Selaginella moellendorffii RepID=D8T979_SELML 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-directed RNA polymerase 8.566e-06
C-terminus
sp_v3.0_unigene62553 SustainPine v3.0 183
AutoFact: PREDICTED: DNA-directed RNA polymerase III subunit RPC2 n=1 Tax=Acyrthosiphon pisum RepID=UPI00017918AB 3.0e-23
FL-Next: sp=DNA-directed RNA polymerase subunit beta; Pinus densiflora (Japanese red pine). Plastid; Chloroplast. 0.0
Sma3: DNA-directed RNA polymerase 6.759e-31
Internal
sp_v3.0_unigene66252 SustainPine v3.0 370
AutoFact: DNA-directed RNA polymerase n=1 Tax=Vitis vinifera RepID=A5AMN9_VITVI 4.0e-25
FL-Next: sp=DNA-directed RNA polymerase subunit beta; Pinus densiflora (Japanese red pine). Plastid; Chloroplast. 0.0
Sma3: DNA-directed RNA polymerase 2.997e-39
Internal
sp_v3.0_unigene74885 SustainPine v3.0 342
AutoFact: DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RNX6_PHYPA 8.0e-17
FL-Next: sp=DNA-directed RNA polymerase; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: DNA-directed RNA polymerase 9.633e-11
N-terminus
sp_v3.0_unigene76907 SustainPine v3.0 285
AutoFact: RNA polymerase II second largest subunit (Fragment) n=1 Tax=Teucrium fruticans RepID=Q6Q254_9LAMI 3.0e-39
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA-directed RNA polymerase 3.49501e-40
Internal
sp_v3.0_unigene78149 SustainPine v3.0 193
AutoFact: DNA-directed RNA polymerase n=2 Tax=Selaginella moellendorffii RepID=D8T979_SELML 3.0e-22
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB2; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Sma3: DNA-directed RNA polymerase 1.324e-14
Internal
sp_v3.0_unigene80919 SustainPine v3.0 157
AutoFact: putative RNA polymerase III [Oryza sativa Japonica Group] 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: DNA-directed RNA polymerase 6.195e-07
Internal
sp_v3.0_unigene150852 SustainPine v3.0 419
AutoFact: DNA-directed RNA polymerase n=1 Tax=Ectocarpus siliculosus RepID=D7G075_ECTSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-directed RNA polymerase 8.757e-34
Complete
sp_v3.0_unigene151015 SustainPine v3.0 393
AutoFact: DNA-directed RNA polymerase n=1 Tax=Ectocarpus siliculosus RepID=D7G075_ECTSI 1.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-directed RNA polymerase 1.699e-31
Complete
sp_v3.0_unigene154287 SustainPine v3.0 436
AutoFact: DNA-directed RNA polymerase n=1 Tax=Ectocarpus siliculosus RepID=D7G075_ECTSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-directed RNA polymerase 3.21e-32
Complete
sp_v3.0_unigene154754 SustainPine v3.0 436
AutoFact: PREDICTED: DNA-directed RNA polymerase III B-like n=1 Tax=Rattus norvegicus RepID=UPI0001CF3F5E 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-directed RNA polymerase 6.549e-30
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain