Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene15147 SustainPine v3.0 1490
AutoFact: RecName: Full=GTP-binding nuclear protein Ran-A1 gb|AAA73563.1| GTP-binding protein [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene17202 SustainPine v3.0 1340
AutoFact: RecName: Full=GTP-binding nuclear protein Ran-A1 gb|AAA73563.1| GTP-binding protein [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene17454 SustainPine v3.0 1375
AutoFact: RecName: Full=GTP-binding nuclear protein Ran-A1 gb|AAA73563.1| GTP-binding protein [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene26194 SustainPine v3.0 498
AutoFact: GTP-binding nuclear protein RAN1, putative n=1 Tax=Ixodes scapularis RepID=B7QIB6_IXOSC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GTP-binding nuclear protein RAN 4.122e-12
N-terminus
sp_v3.0_unigene30353 SustainPine v3.0 1083
AutoFact: GTP-binding protein [Cicer arietinum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene62389 SustainPine v3.0 308
AutoFact: RAN [Nicotiana sylvestris] gb|AAT40987.1| RAN [Nicotiana sylvestris] 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene74722 SustainPine v3.0 293
AutoFact: GTP-binding protein n=1 Tax=Chlorella variabilis RepID=E1ZJ35_9CHLO 1.99965e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related nuclear protein 3 5.807e-08
Internal
sp_v3.0_unigene77112 SustainPine v3.0 341
AutoFact: GTP-binding nuclear protein n=2 Tax=Agaricales RepID=D8PSN6_SCHCM 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related nuclear protein 3 6.433e-08
Internal
sp_v3.0_unigene126657 SustainPine v3.0 1364
AutoFact: RecName: Full=GTP-binding nuclear protein Ran-A1 gb|AAA73563.1| GTP-binding protein [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene127773 SustainPine v3.0 332
AutoFact: putative small Ras GTP-binding protein [Arabidopsis thaliana] 5.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related nuclear protein 3 4.19e-08
C-terminus
sp_v3.0_unigene151946 SustainPine v3.0 231
AutoFact: Ras-related nuclear protein [Priapulus caudatus] 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related nuclear protein 3 5.447e-08
Internal
sp_v3.0_unigene152453 SustainPine v3.0 426
AutoFact: GTP-binding nuclear protein RAN1, putative n=1 Tax=Ixodes scapularis RepID=B7QIB6_IXOSC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related nuclear protein 3 5.807e-08
Putative C-terminus
sp_v3.0_unigene152908 SustainPine v3.0 460
AutoFact: GTP binding nuclear protein RAN n=1 Tax=Bigelowiella natans RepID=Q5YEU7_BIGNA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related nuclear protein 3 5.807e-08
C-terminus
sp_v3.0_unigene154385 SustainPine v3.0 316
AutoFact: Ran n=2 Tax=Branchiostoma RepID=Q1A7N9_BRABE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related nuclear protein 3 7.092e-08
Internal
sp_v3.0_unigene155525 SustainPine v3.0 414
AutoFact: GTP-binding nuclear protein spi1 n=2 Tax=Oomycetes RepID=D0NZ30_PHYIT 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related nuclear protein 3 7.092e-08
Internal
sp_v3.0_unigene156568 SustainPine v3.0 255
AutoFact: PREDICTED: similar to GTP-binding nuclear protein RAN/TC4 n=1 Tax=Hydra magnipapillata RepID=UPI0001924B32 7.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GTP-binding nuclear protein RAN 3.9e-12
Internal
sp_v3.0_unigene157687 SustainPine v3.0 389
AutoFact: GTP-binding nuclear protein Ran n=3 Tax=Tetrahymena RepID=RAN_TETTH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related nuclear protein 3 6.433e-08
Internal
sp_v3.0_unigene157758 SustainPine v3.0 367
AutoFact: GTP-binding nuclear protein Ran n=3 Tax=Caligidae RepID=C1BUI8_9MAXI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GTP-binding nuclear protein RAN 4.122e-12
Putative N-terminus
sp_v3.0_unigene158209 SustainPine v3.0 376
AutoFact: GTP-binding nuclear protein Ran [Danio rerio] sp|P79735.1|RAN_DANRE RecName: Full=GTP-binding nuclear protein Ran; AltName: Full=GTPase Ran; AltName: Full=Ras-related nuclear protein gb|AAB97093.1| Ran [Danio rerio] gb|AAH58047.1| Ras-related nuclear prot 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related nuclear protein 3 3.851e-08
C-terminus
sp_v3.0_unigene202440 SustainPine v3.0 412
AutoFact: RecName: Full=GTP-binding nuclear protein Ran-A1 gb|AAA73563.1| GTP-binding protein [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GTP-binding nuclear protein RAN 4.236e-12
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain