Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: cholesterol transport protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene6306 SustainPine v3.0 4903
AutoFact: Niemann-Pick C1 protein [Arabidopsis thaliana] gb|AEE31919.1| Niemann-Pick C1 protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Cholesterol transport protein 3.622e-09
Complete
sp_v3.0_unigene10383 SustainPine v3.0 1016
AutoFact: Niemann-Pick C1 protein [Arabidopsis thaliana] gb|AEE31919.1| Niemann-Pick C1 protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Sma3: Cholesterol transport protein 3.114e-09
Internal
sp_v3.0_unigene20506 SustainPine v3.0 1309
AutoFact: Cholesterol transport protein n=1 Tax=Populus trichocarpa RepID=B9HPX9_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Sma3: Cholesterol transport protein 3.335e-09
Internal
sp_v3.0_unigene29381 SustainPine v3.0 1353
AutoFact: Niemann-Pick C1 protein [Arabidopsis thaliana] gb|AEE31919.1| Niemann-Pick C1 protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Cholesterol transport protein 2.166e-09
N-terminus
sp_v3.0_unigene37721 SustainPine v3.0 2796
AutoFact: Cholesterol transport protein n=1 Tax=Populus trichocarpa RepID=B9HPX9_POPTR 0.0
FL-Next: tr=Cholesterol transport protein; subsp. trichocarpa). 0.0
Sma3: Cholesterol transport protein 3.335e-09
C-terminus
sp_v3.0_unigene71283 SustainPine v3.0 274
AutoFact: Patched family protein n=1 Tax=Arabidopsis thaliana RepID=F4JTN1_ARATH 4.0e-29
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: Cholesterol transport protein 2.351e-09
Internal
sp_v3.0_unigene71881 SustainPine v3.0 205
AutoFact: PREDICTED: similar to patched family protein n=1 Tax=Vitis vinifera RepID=UPI0001985140 3.0e-17
FL-Next: tr=Hedgehog receptor, putative; Ricinus communis (Castor bean). 0.0
Sma3: Cholesterol transport protein 8.693e-10
Internal
sp_v3.0_unigene107623 SustainPine v3.0 406
AutoFact: Hedgehog receptor, putative n=1 Tax=Ricinus communis RepID=B9R8N7_RICCO 6.0e-35
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Sma3: Cholesterol transport protein 3.114e-09
Internal
sp_v3.0_unigene137636 SustainPine v3.0 198
AutoFact: Cholesterol transport protein n=1 Tax=Populus trichocarpa RepID=B9HPX9_POPTR 5.0e-18
FL-Next: tr=Cholesterol transport protein; subsp. trichocarpa). 0.0
Sma3: Cholesterol transport protein 5.135e-10
Internal
sp_v3.0_unigene147909 SustainPine v3.0 272
AutoFact: Hedgehog receptor, putative n=1 Tax=Ricinus communis RepID=B9R8N7_RICCO 7.0e-37
FL-Next: tr=Hedgehog receptor, putative; Ricinus communis (Castor bean). 0.0
Sma3: Cholesterol transport protein 3.06e-09
Internal
sp_v3.0_unigene157404 SustainPine v3.0 420
AutoFact: Niemann-Pick C type protein n=1 Tax=Polysphondylium pallidum RepID=D3B0C2_POLPA 2.0e-37
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene167034 SustainPine v3.0 130
AutoFact: Niemann-Pick C1 protein n=2 Tax=Arabidopsis RepID=F4I9G5_ARATH 4.0e-15
FL-Next: tr=Predicted protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Sma3: Cholesterol transport protein 3.114e-09
Internal
sp_v3.0_unigene184356 SustainPine v3.0 579
AutoFact: Niemann-Pick C1 protein [Arabidopsis thaliana] gb|AEE31919.1| Niemann-Pick C1 protein [Arabidopsis thaliana] 4.00001e-41
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Cholesterol transport protein 2.258e-09
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain