Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein, partial [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene16347 SustainPine v3.0 516
• AutoFact: Elongation factor 1-alpha n=178 Tax=Eukaryota RepID=EF1A_PIRIN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
C-terminus
sp_v3.0_unigene25870 SustainPine v3.0 432
• AutoFact: translation elongation factor 1-alpha [Capsaspora owczarzaki] gb|EFW42675.1| translation elongation factor 1-alpha [Capsaspora owczarzaki ATCC 30864] 6.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Putative Complete
sp_v3.0_unigene31819 SustainPine v3.0 431
• AutoFact: Elongation factor-1 alpha (Fragment) n=7 Tax=Faviina RepID=C5IV96_9CNID 8.00141e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Putative Complete
sp_v3.0_unigene35754 SustainPine v3.0 510
• AutoFact: Elongation factor 1-alpha (Fragment) n=19 Tax=Myxogastria RepID=D0PPE2_9MYCE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
C-terminus
sp_v3.0_unigene52657 SustainPine v3.0 182
• AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 3.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Putative C-terminus
sp_v3.0_unigene53922 SustainPine v3.0 124
• AutoFact: Elongation factor 1-alpha n=4 Tax=Chara RepID=F1T1F1_9VIRI 3.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha, putative 1.821e-07
Putative N-terminus
sp_v3.0_unigene53980 SustainPine v3.0 387
• AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Putative Complete
sp_v3.0_unigene55832 SustainPine v3.0 76
• AutoFact: Elongation factor 1-alpha n=4 Tax=Chara RepID=F1T1F1_9VIRI 8.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene57132 SustainPine v3.0 472
• AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 4.00001e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 3.315e-18
N-terminus
sp_v3.0_unigene59946 SustainPine v3.0 99
• AutoFact: EF-1 alpha [Gymnadenia conopsea] 2.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 5.584e-08
Putative C-terminus
sp_v3.0_unigene61352 SustainPine v3.0 137
• AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 3.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 4.432e-34
Internal
sp_v3.0_unigene61376 SustainPine v3.0 213
• AutoFact: Elongation factor 1-alpha (Fragment) n=1 Tax=Spirogyra sp. FWAC125 RepID=A6MWT3_9VIRI 4.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Internal
sp_v3.0_unigene62609 SustainPine v3.0 205
• AutoFact: translation elongation factor-1 alpha [Picea abies] 5.0e-26
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 5.071e-34
Internal
sp_v3.0_unigene62805 SustainPine v3.0 199
• AutoFact: Elongation factor 1-alpha, oocyte form n=1 Tax=Salmo salar RepID=B5X6L3_SALSA 8.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1 alpha 3.58e-12
N-terminus
sp_v3.0_unigene63301 SustainPine v3.0 264
• AutoFact: translation elongation factor-1 alpha [Picea abies] 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 7.542e-34
Internal
sp_v3.0_unigene63566 SustainPine v3.0 177
• AutoFact: EF-1 alpha [Gymnadenia conopsea] 2.0e-10
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 2.893e-22
Putative C-terminus
sp_v3.0_unigene64056 SustainPine v3.0 177
• AutoFact: Putative elongation factor 1A (Fragment) n=1 Tax=Cupressus sempervirens RepID=B1PID4_9CONI 2.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Internal
sp_v3.0_unigene64364 SustainPine v3.0 174
• AutoFact: translation elongation factor-1 alpha [Picea abies] 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 1.157e-33
Putative N-terminus
sp_v3.0_unigene64495 SustainPine v3.0 163
• AutoFact: translation elongation factor-1 alpha [Picea abies] 1.0e-15
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 2.008e-16
Internal
sp_v3.0_unigene65088 SustainPine v3.0 259
• AutoFact: RecName: Full=Elongation factor 1-alpha; Short=EF-1-alpha 4.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain