Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein, partial [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene79934 SustainPine v3.0 250
• AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 2.0e-29
• FL-Next: sp=Elongation factor 1-alpha; Glycine max (Soybean) (Glycine hispida). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Internal
sp_v3.0_unigene80177 SustainPine v3.0 194
• AutoFact: translation elongation factor-1 alpha [Picea abies] 3.0e-12
• FL-Next: sp=Elongation factor 1-alpha; Euglena gracilis. 0.0
• Sma3: Elongation factor 1-alpha 1.313e-33
Internal
sp_v3.0_unigene80231 SustainPine v3.0 208
• AutoFact: Translation elongation factor 1-alpha (Fragment) n=3 Tax=Hypocreales RepID=A4U9K0_9HYPO 5.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Internal
sp_v3.0_unigene81513 SustainPine v3.0 148
• AutoFact: Elongation factor 1-alpha (Fragment) n=38 Tax=Microbotryaceae RepID=Q0MX41_9BASI 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 7.132e-31
Putative N-terminus
sp_v3.0_unigene105343 SustainPine v3.0 313
• AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Internal
sp_v3.0_unigene107919 SustainPine v3.0 225
• AutoFact: Putative elongation factor 1A (Fragment) n=1 Tax=Cupressus sempervirens RepID=B1PID4_9CONI 4.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Putative C-terminus
sp_v3.0_unigene124827 SustainPine v3.0 257
• AutoFact: Putative elongation factor 1-alpha (Fragment) n=1 Tax=Diaphorina citri RepID=Q0PWT7_DIACI 5.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Putative C-terminus
sp_v3.0_unigene126973 SustainPine v3.0 950
• AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Putative Complete
sp_v3.0_unigene127544 SustainPine v3.0 580
• AutoFact: translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92326.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menziesii] gb|AAV92327.1| translation elongation factor-1 alpha [Pseudotsuga menziesii var. menzi 9.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Putative Complete
sp_v3.0_unigene141314 SustainPine v3.0 395
• AutoFact: Putative elongation factor 1A (Fragment) n=1 Tax=Cupressus sempervirens RepID=B1PID4_9CONI 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
C-terminus
sp_v3.0_unigene146301 SustainPine v3.0 634
• AutoFact: Putative elongation factor 1A (Fragment) n=1 Tax=Cupressus sempervirens RepID=B1PID4_9CONI 2.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Complete
sp_v3.0_unigene150510 SustainPine v3.0 197
• AutoFact: Elongation factor 1-alpha (Fragment) n=2 Tax=Eukaryota RepID=Q2TTF2_9EUKA 1.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Internal
sp_v3.0_unigene152027 SustainPine v3.0 433
• AutoFact: Elongation factor 1-alpha n=1 Tax=Trypanosoma brucei gambiense DAL972 RepID=D0A1M9_TRYB9 7.00649e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
C-terminus
sp_v3.0_unigene152867 SustainPine v3.0 406
• AutoFact: Elongation factor 1-alpha n=1 Tax=Strongyloides stercoralis RepID=B5RI03_9BILA 2.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
C-terminus
sp_v3.0_unigene152977 SustainPine v3.0 488
• AutoFact: Elongation factor 1-alpha (Fragment) n=1 Tax=Colpoda inflata RepID=O96974_9CILI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
C-terminus
sp_v3.0_unigene157170 SustainPine v3.0 356
• AutoFact: Elongation factor 1 alpha (Fragment) n=1 Tax=Cyclotella cryptica RepID=Q5EVA4_9STRA 1.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Putative Complete
sp_v3.0_unigene166618 SustainPine v3.0 401
• AutoFact: PREDICTED: similar to eukaryotic translation elongation factor 1 alpha 2 isoform 3 n=1 Tax=Ciona intestinalis RepID=UPI000180BFD5 5.99994e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
C-terminus
sp_v3.0_unigene186107 SustainPine v3.0 488
• AutoFact: Elongation factor 1-alpha n=1 Tax=Solea senegalensis RepID=A6BMG3_SOLSE 4.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
C-terminus
sp_v3.0_unigene188736 SustainPine v3.0 406
• AutoFact: Elongation factor 1-alpha (Fragment) n=2 Tax=Eukaryota RepID=Q2TTF2_9EUKA 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Putative C-terminus
sp_v3.0_unigene205454 SustainPine v3.0 449
• AutoFact: Elongation factor 1-alpha n=1 Tax=Brachionus plicatilis RepID=C6L868_BRAPC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-alpha 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain