Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene2918 SustainPine v3.0 550
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 2.156e-11
C-terminus
sp_v3.0_unigene19692 SustainPine v3.0 301
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 2.796e-11
C-terminus
sp_v3.0_unigene19863 SustainPine v3.0 349
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide (PPR) repeat-containing protein-like 2.659e-08
C-terminus
sp_v3.0_unigene49263 SustainPine v3.0 279
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170 emb|CAB36791.1| putative protein [Arabidopsis thaliana] emb|CAB80034.1| putative protein [Arabid 2.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide, putative, expressed 1.347e-14
C-terminus
sp_v3.0_unigene63698 SustainPine v3.0 236
• AutoFact: Tetratricopeptide-like helical [Medicago truncatula] 8.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 7.372e-14
C-terminus
sp_v3.0_unigene63990 SustainPine v3.0 180
• AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Lepidogyna hodgsoniae RepID=B3U1Z4_9MARC 6.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
Internal
sp_v3.0_unigene64234 SustainPine v3.0 150
• AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Metzgeria furcata RepID=B3U1P8_9MARC 2.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
Internal
sp_v3.0_unigene68027 SustainPine v3.0 345
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 2.134e-16
C-terminus
sp_v3.0_unigene69131 SustainPine v3.0 335
• AutoFact: Pentatricopeptide repeat domain containing protein, putative [Solanum demissum] 3.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide (PPR) repeat-containing protein-like 2.049e-06
C-terminus
sp_v3.0_unigene70713 SustainPine v3.0 298
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758 gb|AEE86306.1| pentatricopeptide repeat-containing 8.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Selenium-binding protein-like 1.659e-07
C-terminus
sp_v3.0_unigene71291 SustainPine v3.0 308
• AutoFact: Pentatricopeptide repeat domain containing protein, putative [Solanum demissum] 2.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide (PPR) repeat-containing protein-like 2.144e-06
C-terminus
sp_v3.0_unigene72882 SustainPine v3.0 148
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide (PPR) repeat-containing protein-like 7.471e-08
C-terminus
sp_v3.0_unigene75341 SustainPine v3.0 312
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide, putative, expressed 2.087e-06
C-terminus
sp_v3.0_unigene109228 SustainPine v3.0 618
• AutoFact: PREDICTED: similar to Tetratricopeptide-like helical n=1 Tax=Vitis vinifera RepID=UPI0001984A05 1.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide (PPR) repeat-containing protein-like 3.111e-10
C-terminus
sp_v3.0_unigene109970 SustainPine v3.0 166
• AutoFact: Tetratricopeptide-like helical [Medicago truncatula] 1.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide (PPR) repeat-containing protein-like 5.467e-08
C-terminus
sp_v3.0_unigene128021 SustainPine v3.0 588
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
C-terminus
sp_v3.0_unigene130522 SustainPine v3.0 262
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide (PPR) repeat-containing protein-like 3.276e-08
C-terminus
sp_v3.0_unigene133007 SustainPine v3.0 454
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170 emb|CAB36791.1| putative protein [Arabidopsis thaliana] emb|CAB80034.1| putative protein [Arabid 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tetratricopeptide-like helical 2.58e-09
C-terminus
sp_v3.0_unigene133222 SustainPine v3.0 207
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide, putative, expressed 6.93e-08
C-terminus
sp_v3.0_unigene136916 SustainPine v3.0 287
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 2.241e-11
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain