Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: s-adenosylmethionine synthetase 2 [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene4912 SustainPine v3.0 1122
AutoFact: S-adenosylmethionine synthase 1 n=12 Tax=Spermatophyta RepID=METK1_HORVU 0.0
FL-Next: sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Methionine S-adenosyl transferase 1.285e-35
C-terminus
sp_v3.0_unigene17099 SustainPine v3.0 1550
AutoFact: S-adenosylmethionine synthase 1 n=12 Tax=Spermatophyta RepID=METK1_HORVU 0.0
FL-Next: sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene17246 SustainPine v3.0 1700
AutoFact: S-adenosylmethionine synthase 3 n=6 Tax=Embryophyta RepID=METK3_ARATH 0.0
FL-Next: sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene35691 SustainPine v3.0 782
AutoFact: S-adenosylmethionine synthetase (Fragment) n=1 Tax=Salvia miltiorrhiza RepID=Q84RM7_SALMI 0.0
FL-Next: sp=S-adenosylmethionine synthase 3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: S-adenosylmethionine synthetase 1.75302e-41
C-terminus
sp_v3.0_unigene35725 SustainPine v3.0 353
AutoFact: S-adenosyl methionine synthetase 2 (Fragment) n=10 Tax=Pinaceae RepID=Q5EK82_PINTA 6.0e-22
FL-Next: sp=S-adenosylmethionine synthase 3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: S-adenosylmethionine synthetase 1.37e-28
C-terminus
sp_v3.0_unigene36473 SustainPine v3.0 505
AutoFact: S-adenosyl methionine synthetase 2 (Fragment) n=10 Tax=Pinaceae RepID=Q5EK82_PINTA 0.0
FL-Next: sp=S-adenosylmethionine synthase 3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: S-adenosylmethionine synthetase 1.874e-36
C-terminus
sp_v3.0_unigene51375 SustainPine v3.0 106
AutoFact: S-adenosylmethionine synthase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TJH4_PHYPA 5.0e-11
FL-Next: sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: S-adenosylmethionine synthetase 5.186e-39
Internal
sp_v3.0_unigene63152 SustainPine v3.0 189
AutoFact: S-adenosylmethionine synthase 1 n=24 Tax=Tracheophyta RepID=METK1_VITVI 2.0e-15
FL-Next: sp=S-adenosylmethionine synthase 1; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: S-adenosylmethionine synthetase 2.982e-34
Putative N-terminus
sp_v3.0_unigene63964 SustainPine v3.0 134
AutoFact: S-adenosyl methionine synthetase 2 (Fragment) n=10 Tax=Pinaceae RepID=Q5EK82_PINTA 1.0e-12
FL-Next: sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: S-adenosylmethionine synthetase 4.682e-34
Internal
sp_v3.0_unigene65193 SustainPine v3.0 103
AutoFact: S-adenosylmethionine synthase 1 n=24 Tax=Tracheophyta RepID=METK1_VITVI 4.0e-08
FL-Next: sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: S-adenosylmethionine synthetase 3.003e-19
Internal
sp_v3.0_unigene65888 SustainPine v3.0 213
AutoFact: S-adenosylmethionine synthase 2 (Fragment) n=3 Tax=core eudicotyledons RepID=METK2_PETCR 4.0e-24
FL-Next: sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: S-adenosylmethionine synthetase 3.34e-39
Internal
sp_v3.0_unigene131137 SustainPine v3.0 556
AutoFact: S-adenosylmethionine synthase 3 n=6 Tax=Embryophyta RepID=METK3_ARATH 6.0e-13
FL-Next: sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: S-adenosylmethionine synthetase 4.595e-39
Misassembled
sp_v3.0_unigene144145 SustainPine v3.0 1155
AutoFact: RecName: Full=S-adenosylmethionine synthase 2; Short=AdoMet synthase 2; AltName: Full=Methionine adenosyltransferase 2; Short=MAT 2 gb|AAG17036.1|AF187821_1 S-adenosylmethionine synthetase [Pinus contorta] 0.0
FL-Next: sp=S-adenosylmethionine synthase 2; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
Sma3: Methionine S-adenosyl transferase 1.26e-35
Complete
sp_v3.0_unigene145695 SustainPine v3.0 975
AutoFact: S-adenosylmethionine synthase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TIR8_VITVI 0.0
FL-Next: sp=S-adenosylmethionine synthase 2; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
Sma3: Methionine S-adenosyl transferase 1.44e-35
C-terminus
sp_v3.0_unigene146442 SustainPine v3.0 494
AutoFact: S-adenosylmethionine synthase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TJH4_PHYPA 1.99965e-42
FL-Next: sp=S-adenosylmethionine synthase 1; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: S-adenosylmethionine synthetase 4.258e-31
Misassembled
sp_v3.0_unigene146876 SustainPine v3.0 942
AutoFact: S-adenosylmethionine synthase 3 n=6 Tax=Embryophyta RepID=METK3_ARATH 0.0
FL-Next: sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Methionine S-adenosyl transferase 1.386e-35
C-terminus
sp_v3.0_unigene146970 SustainPine v3.0 657
AutoFact: S-adenosylmethionine synthase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TIR8_VITVI 0.0
FL-Next: sp=S-adenosylmethionine synthase 2; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
Sma3: Methionine S-adenosyl transferase 7.875e-36
Internal
sp_v3.0_unigene147036 SustainPine v3.0 1192
AutoFact: S-adenosylmethionine synthase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TIR8_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Methionine S-adenosyl transferase 1.19e-35
C-terminus
sp_v3.0_unigene154098 SustainPine v3.0 184
AutoFact: S-adenosylmethionine synthase n=1 Tax=Porphyra yezoensis RepID=B7TXX0_PORYE 1.0e-12
FL-Next: sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: S-adenosylmethionine synthetase 9.41953e-42
Internal
sp_v3.0_unigene157481 SustainPine v3.0 346
AutoFact: PREDICTED: methionine adenosyltransferase I, alpha n=1 Tax=Taeniopygia guttata RepID=UPI000194C792 0.0
FL-Next: sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: S-adenosylmethionine synthetase 2.12801e-41
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain