Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene7590 SustainPine v3.0 935
AutoFact: mRNA splicing factor, thioredoxin-like U5 snRNP [Arabidopsis thaliana] gb|AAS49089.1| At3g24730 [Arabidopsis thaliana] gb|AEE76940.1| mRNA splicing factor, thioredoxin-like U5 snRNP [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene50132 SustainPine v3.0 1284
AutoFact: mRNA splicing factor, thioredoxin-like U5 snRNP [Arabidopsis thaliana] gb|AAS49089.1| At3g24730 [Arabidopsis thaliana] gb|AEE76940.1| mRNA splicing factor, thioredoxin-like U5 snRNP [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene97126 SustainPine v3.0 488
AutoFact: mRNA splicing factor, thioredoxin-like U5 snRNP [Arabidopsis thaliana] gb|AAS49089.1| At3g24730 [Arabidopsis thaliana] gb|AEE76940.1| mRNA splicing factor, thioredoxin-like U5 snRNP [Arabidopsis thaliana] 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene152382 SustainPine v3.0 334
AutoFact: thioredoxin-like protein 4B [Danio rerio] gb|AAI07847.1| Zgc:123253 [Danio rerio] emb|CAX13746.1| novel protein similar to vertebrate thioredoxin-like 4B (TXNL4B, zgc:123253) [Danio rerio] 8.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene186558 SustainPine v3.0 535
AutoFact: PREDICTED: thioredoxin-like 4B isoform 4 [Macaca mulatta] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain