Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein, partial [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene29097 SustainPine v3.0 520
• AutoFact: chlorophyll(ide) b reductase [Arabidopsis thaliana] sp|Q93ZA0.1|NYC1_ARATH RecName: Full=Probable chlorophyll(ide) b reductase NYC1, chloroplastic; AltName: Full=Protein NON-YELLOW COLORING 1; Short=AtNYC1; Flags: Precursor gb|AAL15327.1| AT4g13250/F17N18 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene50266 SustainPine v3.0 784
• AutoFact: chlorophyll(ide) b reductase [Arabidopsis thaliana] sp|Q93ZA0.1|NYC1_ARATH RecName: Full=Probable chlorophyll(ide) b reductase NYC1, chloroplastic; AltName: Full=Protein NON-YELLOW COLORING 1; Short=AtNYC1; Flags: Precursor gb|AAL15327.1| AT4g13250/F17N18 8.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene51975 SustainPine v3.0 236
• AutoFact: Putative short-chain dehydrogenase/reductase (Fragment) n=1 Tax=Cucumis sativus RepID=C6L815_CUCSA 1.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene58273 SustainPine v3.0 278
• AutoFact: Probable chlorophyll(ide) b reductase NYC1, chloroplastic n=5 Tax=Poaceae RepID=NYC1_ORYSJ 3.0e-17
• FL-Next: sp=Probable chlorophyll(ide) b reductase NYC1, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene77324 SustainPine v3.0 458
• AutoFact: chlorophyll(ide) b reductase [Arabidopsis thaliana] sp|Q93ZA0.1|NYC1_ARATH RecName: Full=Probable chlorophyll(ide) b reductase NYC1, chloroplastic; AltName: Full=Protein NON-YELLOW COLORING 1; Short=AtNYC1; Flags: Precursor gb|AAL15327.1| AT4g13250/F17N18 1.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene101998 SustainPine v3.0 435
• AutoFact: chlorophyll(ide) b reductase [Arabidopsis thaliana] sp|Q93ZA0.1|NYC1_ARATH RecName: Full=Probable chlorophyll(ide) b reductase NYC1, chloroplastic; AltName: Full=Protein NON-YELLOW COLORING 1; Short=AtNYC1; Flags: Precursor gb|AAL15327.1| AT4g13250/F17N18 2.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene124672 SustainPine v3.0 248
• AutoFact: Unassigned protein
• FL-Next: sp=Probable chlorophyll(ide) b reductase NYC1, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain