Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene32011 SustainPine v3.0 409
AutoFact: 40S ribosomal protein S8 n=1 Tax=Salpingoeca sp. ATCC 50818 RepID=F2U4R4_9EUKA 1.0e-35
FL-Next: sp=40S ribosomal protein S8; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein S8 0.0
C-terminus
sp_v3.0_unigene35862 SustainPine v3.0 462
AutoFact: 40S ribosomal protein S82 putative n=1 Tax=Albugo laibachii Nc14 RepID=F0WM71_9STRA 0.0
FL-Next: sp=40S ribosomal protein S8; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein S8 0.0
N-terminus
sp_v3.0_unigene77388 SustainPine v3.0 402
AutoFact: 40S ribosomal protein S8 n=2 Tax=Perkinsus marinus ATCC 50983 RepID=C5K7X6_9ALVE 5.60519e-45
FL-Next: sp=40S ribosomal protein S8; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein S8 0.0
N-terminus
sp_v3.0_unigene79168 SustainPine v3.0 328
AutoFact: 40S ribosomal protein S8 n=2 Tax=Schizophyllum commune RepID=D8QBY3_SCHCM 1.0e-37
FL-Next: sp=40S ribosomal protein S8; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein S8 0.0
Internal
sp_v3.0_unigene151303 SustainPine v3.0 248
AutoFact: 40S ribosome protein S8 (Fragment) n=1 Tax=Griffithsia japonica RepID=Q7XYA6_GRIJA 3.0e-13
FL-Next: sp=40S ribosomal protein S8; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein S8 8.059e-30
C-terminus
sp_v3.0_unigene155793 SustainPine v3.0 250
AutoFact: 40S ribosomal protein S8 n=1 Tax=Thalassiosira pseudonana RepID=B8CB96_THAPS 6.0e-35
FL-Next: sp=40S ribosomal protein S8; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein S8 0.0
Internal
sp_v3.0_unigene161098 SustainPine v3.0 250
AutoFact: 40S ribosomal protein S8 n=1 Tax=Dictyostelium purpureum RepID=F0ZUN9_DICPU 3.0e-12
FL-Next: sp=40S ribosomal protein S8; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene166517 SustainPine v3.0 388
AutoFact: 40S ribosomal protein S8 n=1 Tax=Suberites domuncula RepID=Q4KTD4_SUBDO 8.0e-38
FL-Next: sp=40S ribosomal protein S8; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein S8 0.0
N-terminus
sp_v3.0_unigene187505 SustainPine v3.0 500
AutoFact: 40S ribosomal protein S8 n=1 Tax=Pyrenophora teres f. teres 0-1 RepID=E3S2E5_PYRTT 0.0
FL-Next: sp=40S ribosomal protein S8; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein S8 2.99e-11
C-terminus
sp_v3.0_unigene188710 SustainPine v3.0 308
AutoFact: 40S ribosomal protein S8 n=1 Tax=Malassezia globosa CBS 7966 RepID=A8PWI9_MALGO 3.0e-16
FL-Next: sp=40S ribosomal protein S8; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein S8 0.0
C-terminus
sp_v3.0_unigene190052 SustainPine v3.0 323
AutoFact: 40S ribosomal protein S8 n=1 Tax=Branchiostoma floridae RepID=C3YMK6_BRAFL 3.0e-36
FL-Next: sp=40S ribosomal protein S8; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein S8 0.0
Putative N-terminus
sp_v3.0_unigene192952 SustainPine v3.0 353
AutoFact: 40S ribosome protein S8 (Fragment) n=1 Tax=Griffithsia japonica RepID=Q7XYA6_GRIJA 1.0e-16
FL-Next: sp=40S ribosomal protein S8; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein S8 7.731e-18
C-terminus
sp_v3.0_unigene200339 SustainPine v3.0 501
AutoFact: 40S ribosomal protein S82 putative n=1 Tax=Albugo laibachii Nc14 RepID=F0WM71_9STRA 0.0
FL-Next: sp=40S ribosomal protein S8; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein S8 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain