Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: light-harvesting complex II protein Lhcb1 [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene53483 SustainPine v3.0 414
AutoFact: light-harvesting chlorophyll-a/b binding protein LhcbM2a [Chlamydomonas incerta] 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 0.0
Putative Complete
sp_v3.0_unigene57073 SustainPine v3.0 296
AutoFact: Chlorophyll a-b binding protein of LHCII n=2 Tax=Chlamydomonas RepID=Q9ZSJ4_CHLRE 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 1.457e-23
Putative C-terminus
sp_v3.0_unigene65738 SustainPine v3.0 174
AutoFact: Light-harvesting complex II protein Lhcb1 n=2 Tax=Magnoliophyta RepID=B9I107_POPTR 2.0e-12
FL-Next: tr=Chlorophyll a/b binding protein; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
Sma3: LHCP 1.102e-16
Internal
sp_v3.0_unigene135740 SustainPine v3.0 264
AutoFact: Chlorophyll a-b binding protein of LHCII n=2 Tax=Chlamydomonas RepID=Q9ZSJ4_CHLRE 1.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: LHCP 4.256e-29
C-terminus
sp_v3.0_unigene143667 SustainPine v3.0 184
AutoFact: Chlorophyll a-b binding protein type 2 member 1A, chloroplastic n=37 Tax=Spermatophyta RepID=CB2A_PINSY 4.0e-18
FL-Next: sp=Chlorophyll a-b binding protein type 2 member 1A, chloroplastic; Pinus sylvestris (Scots pine). 0.0
Sma3: LHCP 9.277e-22
Internal
sp_v3.0_unigene149769 SustainPine v3.0 221
AutoFact: Light-harvesting complex II protein Lhcb1 n=2 Tax=Magnoliophyta RepID=B9I107_POPTR 3.0e-35
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Sma3: LHCP 2.229e-36
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain