Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: aquaporin, MIP family, PIP subfamily [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene127851 SustainPine v3.0 1417
• AutoFact: Probable aquaporin n=2 Tax=Picea RepID=Q3ZDL5_PICAB 0.0
• FL-Next: tr=Probable aquaporin; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Plasma membrane intrinsic protein 2.52514e-42
Complete
sp_v3.0_unigene143827 SustainPine v3.0 607
• AutoFact: Putative aquaporin (Fragment) n=2 Tax=Cupressaceae RepID=Q0EEM0_CRYJA 3.00004e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Plasma membrane intrinsic protein 1.904e-32
C-terminus
sp_v3.0_unigene144759 SustainPine v3.0 1167
• AutoFact: putative aquaporin PIP2-8 [Arabidopsis thaliana] sp|Q9ZVX8.1|PIP28_ARATH RecName: Full=Probable aquaporin PIP2-8; AltName: Full=Plasma membrane intrinsic protein 2-8; Short=AtPIP2;8; AltName: Full=Plasma membrane intrinsic protein 3b; Short=PIP3b gb|AAC64 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Aquaporin 0.0
Putative Complete
sp_v3.0_unigene145774 SustainPine v3.0 581
• AutoFact: Putative aquaporin (Fragment) n=2 Tax=Cupressaceae RepID=Q0EEM0_CRYJA 1.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Aquaporin 1.006e-34
Putative N-terminus
sp_v3.0_unigene145915 SustainPine v3.0 363
• AutoFact: Probable aquaporin n=2 Tax=Picea RepID=Q3ZDL5_PICAB 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Aquaporin 2.52514e-42
Internal
sp_v3.0_unigene145938 SustainPine v3.0 1184
• AutoFact: Probable aquaporin n=4 Tax=Picea RepID=O65045_PICMA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Aquaporin 0.0
Misassembled
sp_v3.0_unigene146322 SustainPine v3.0 597
• AutoFact: Probable aquaporin (Fragment) n=1 Tax=Picea abies RepID=Q3ZDL3_PICAB 2.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Aquaporin 4.071e-40
Putative C-terminus
sp_v3.0_unigene146441 SustainPine v3.0 335
• AutoFact: Probable aquaporin n=2 Tax=Picea RepID=Q3ZDL5_PICAB 2.0e-28
• FL-Next: tr=Probable aquaporin; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Aquaporin 0.0
N-terminus
sp_v3.0_unigene146475 SustainPine v3.0 568
• AutoFact: probable aquaporin [Picea abies] 2.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Plasma membrane intrinsic protein 7.194e-36
C-terminus
sp_v3.0_unigene207356 SustainPine v3.0 570
• AutoFact: Probable aquaporin n=2 Tax=Picea RepID=Q3ZDL5_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Aquaporin 8.981e-35
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain