Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chromatin remodeling complex subunit [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene72765 SustainPine v3.0 280
• AutoFact: SNF2 family DNA-dependent ATPase (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RDV9_PHYPA 1.0e-29
• FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene105368 SustainPine v3.0 217
• AutoFact: Snf2 histone linker phd ring helicase, putative n=1 Tax=Ricinus communis RepID=B9S4G9_RICCO 2.0e-17
• FL-Next: tr=Snf2 histone linker phd ring helicase, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene121439 SustainPine v3.0 269
• AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9N1U4_POPTR 1.0e-18
• FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene131674 SustainPine v3.0 440
• AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9N1U4_POPTR 4.0e-35
• FL-Next: tr=Chromatin remodeling complex subunit; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene137534 SustainPine v3.0 414
• AutoFact: RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein n=1 Tax=Arabidopsis thaliana RepID=F4II36_ARATH 2.0e-27
• FL-Next: tr=RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: SNF2/SWI2 family global transcription factor 8.772e-06
Internal
sp_v3.0_unigene148784 SustainPine v3.0 320
• AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9N1U4_POPTR 1.0e-09
• FL-Next: tr=Chromatin remodeling complex subunit; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene194612 SustainPine v3.0 197
• AutoFact: RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein n=1 Tax=Arabidopsis thaliana RepID=F4II36_ARATH 5.0e-14
• FL-Next: tr=RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain