Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene186156 SustainPine v3.0 476
AutoFact: ubiquitin-like protein/ribosomal protein [Phytophthora infestans T30-4] gb|AAY43412.1| ubiquitin-like protein/ribosomal protein [Phytophthora infestans] gb|EEY52907.1| ubiquitin-like protein/ribosomal protein [Phytophthora infestans T30-4] 7.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein S30 3.362e-17
Complete
sp_v3.0_unigene191718 SustainPine v3.0 193
AutoFact: 40S ribosomal protein S30 n=1 Tax=Dictyostelium fasciculatum RepID=F4Q9S8_9MYCE 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein S30 3.362e-17
Putative Complete
sp_v3.0_unigene192984 SustainPine v3.0 463
AutoFact: 40S ribosomal protein S30 n=1 Tax=Dictyostelium fasciculatum RepID=F4Q9S8_9MYCE 1.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein S30 3.362e-17
Complete
sp_v3.0_unigene202867 SustainPine v3.0 486
AutoFact: PREDICTED: similar to rCG47344 n=1 Tax=Taeniopygia guttata RepID=UPI000194E462 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein S30 3.362e-17
Putative Complete
sp_v3.0_unigene203380 SustainPine v3.0 480
AutoFact: Ribosomal protein S30 containing protein [Tetrahymena thermophila] pdb|2XZM|X Chain X, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 p 5.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein S30 3.362e-17
Complete
sp_v3.0_unigene207871 SustainPine v3.0 430
AutoFact: 40S ribosomal protein S30 [Arabidopsis thaliana] ref|NP_200478.1| 40S ribosomal protein S30 [Arabidopsis thaliana] ref|NP_565458.1| 40S ribosomal protein S30 [Arabidopsis thaliana] ref|XP_002866160.1| 40S ribosomal protein S30 [Arabidopsis lyrata subsp. l 3.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene207957 SustainPine v3.0 320
AutoFact: 40S ribosomal protein S30 [Arabidopsis thaliana] ref|NP_200478.1| 40S ribosomal protein S30 [Arabidopsis thaliana] ref|NP_565458.1| 40S ribosomal protein S30 [Arabidopsis thaliana] ref|XP_002866160.1| 40S ribosomal protein S30 [Arabidopsis lyrata subsp. l 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain