Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene2796 SustainPine v3.0 1225
• AutoFact: putative ARP2/3 complex 20 kDa subunit, 3'-partial [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative actin-related complex protein 0.0
Complete
sp_v3.0_unigene31120 SustainPine v3.0 810
• AutoFact: actin related protein 2/3 complex, subunit 4, 20kDa [Xenopus (Silurana) tropicalis] ref|NP_001087956.1| actin related protein 2/3 complex, subunit 4, 20kDa [Xenopus laevis] gb|AAH74659.1| actin related protein 2/3 complex, subunit 4, 20kDa [Xenopus (Silur 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene32250 SustainPine v3.0 460
• AutoFact: Actin related protein n=1 Tax=Lumbricus rubellus RepID=O46159_LUMRU 1.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene33377 SustainPine v3.0 611
• AutoFact: actin related protein 2/3 complex subunit 4 [Suberites domuncula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene78082 SustainPine v3.0 159
• AutoFact: ARPC p20 [Glycine max] 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: cDNA clone:J033082P03, full insert sequence 6.823e-06
C-terminus
sp_v3.0_unigene150350 SustainPine v3.0 325
• AutoFact: ARP2/3 complex 20 kDa subunit [Neurospora crassa OR74A] ref|XP_003349024.1| hypothetical protein SMAC_06801 [Sordaria macrospora k-hell] gb|EAA36313.1| ARP2/3 complex 20 kDa subunit [Neurospora crassa OR74A] emb|CBI54822.1| unnamed protein product [Sordar 4.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene151400 SustainPine v3.0 391
• AutoFact: PREDICTED: putative actin related protein 2/3 complex subunit 4 n=1 Tax=Taeniopygia guttata RepID=UPI000194D266 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene151530 SustainPine v3.0 398
• AutoFact: actin related protein 2/3 complex, subunit 4, 20kDa [Xenopus (Silurana) tropicalis] ref|NP_001087956.1| actin related protein 2/3 complex, subunit 4, 20kDa [Xenopus laevis] gb|AAH74659.1| actin related protein 2/3 complex, subunit 4, 20kDa [Xenopus (Silur 9.99967e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene152190 SustainPine v3.0 326
• AutoFact: Actin related protein 2/3 complex subunit 4 n=1 Tax=Suberites domuncula RepID=A3QX09_SUBDO 5.00264e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene152891 SustainPine v3.0 199
• AutoFact: Neural class-II beta tubulin n=1 Tax=Taenia asiatica RepID=A3F4W4_TAEAS 3.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene153841 SustainPine v3.0 397
• AutoFact: Actin related protein 2/3 complex n=2 Tax=Dictyosteliida RepID=D3BJ37_POLPA 4.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene157984 SustainPine v3.0 378
• AutoFact: actin related protein 2/3 complex, subunit 4, 20kDa [Xenopus (Silurana) tropicalis] ref|NP_001087956.1| actin related protein 2/3 complex, subunit 4, 20kDa [Xenopus laevis] gb|AAH74659.1| actin related protein 2/3 complex, subunit 4, 20kDa [Xenopus (Silur 2.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene158175 SustainPine v3.0 343
• AutoFact: Arp2/3 complex 20 kD subunit, putative n=6 Tax=Neoptera RepID=E0VA94_PEDHC 4.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene158817 SustainPine v3.0 484
• AutoFact: Probable ARP2/3 complex 20 kDa subunit n=1 Tax=Sporisorium reilianum RepID=E6ZYJ4_9BASI 1.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene183151 SustainPine v3.0 648
• AutoFact: Actin related protein 2/3 complex subunit 4 n=1 Tax=Suberites domuncula RepID=A3QX09_SUBDO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene192538 SustainPine v3.0 448
• AutoFact: Putative ARP2/3 complex 20KD subunit (P20-ARC) n=1 Tax=Ciona intestinalis RepID=Q8I7E3_CIOIN 2.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene193647 SustainPine v3.0 440
• AutoFact: actin related protein 2/3 complex subunit 4 [Suberites domuncula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene198804 SustainPine v3.0 497
• AutoFact: Arp2/3 complex 20 kDa subunit n=3 Tax=Agaricales RepID=A8N5Y3_COPC7 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene200116 SustainPine v3.0 375
• AutoFact: Actin-related protein 2/3 complex subunit 4 n=2 Tax=Dictyostelium RepID=ARPC4_DICDI 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain