Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene16965 SustainPine v3.0 992
AutoFact: 60S ribosomal protein L27a-3 [Arabidopsis thaliana] ref|XP_002888788.1| 60S ribosomal protein L27A [Arabidopsis lyrata subsp. lyrata] sp|P49637.2|R27A3_ARATH RecName: Full=60S ribosomal protein L27a-3 gb|AAG52338.1|AC011663_17 60S ribosomal protein L27A; 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene24180 SustainPine v3.0 492
AutoFact: L27a n=1 Tax=Suberites domuncula RepID=Q4KTF7_SUBDO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L27A 1.427e-12
Complete
sp_v3.0_unigene31971 SustainPine v3.0 492
AutoFact: 60S ribosomal protein L27a n=59 Tax=Tetrapoda RepID=RL27A_HUMAN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L27a 8.383e-16
Complete
sp_v3.0_unigene152212 SustainPine v3.0 413
AutoFact: 60S ribosomal protein L27a [Rattus norvegicus] sp|P18445.3|RL27A_RAT RecName: Full=60S ribosomal protein L27a emb|CAA36947.1| unnamed protein product [Rattus rattus] gb|EDM17913.1| rCG40615, isoform CRA_b [Rattus norvegicus] prf||1617101A ribosomal protei 8.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L27a-2 4.997e-12
Putative Complete
sp_v3.0_unigene154523 SustainPine v3.0 387
AutoFact: PREDICTED: similar to 60S ribosomal protein L27a n=1 Tax=Hydra magnipapillata RepID=UPI0001923E6C 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L27a 6.788e-16
C-terminus
sp_v3.0_unigene154608 SustainPine v3.0 497
AutoFact: PREDICTED: similar to 60S ribosomal protein L27a n=1 Tax=Hydra magnipapillata RepID=UPI0001923E6C 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L27A 1.464e-12
Complete
sp_v3.0_unigene202931 SustainPine v3.0 479
AutoFact: 60S ribosomal protein l27a n=2 Tax=Ictalurus punctatus RepID=E3TEN4_ICTPU 8.00141e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L27a 8.674e-16
Complete
sp_v3.0_unigene203389 SustainPine v3.0 537
AutoFact: L27a n=1 Tax=Suberites domuncula RepID=Q4KTF7_SUBDO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L27a 9.278e-16
Complete
sp_v3.0_unigene207801 SustainPine v3.0 519
AutoFact: 60S ribosomal protein L27a-3 [Arabidopsis thaliana] ref|XP_002888788.1| 60S ribosomal protein L27A [Arabidopsis lyrata subsp. lyrata] sp|P49637.2|R27A3_ARATH RecName: Full=60S ribosomal protein L27a-3 gb|AAG52338.1|AC011663_17 60S ribosomal protein L27A; 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L27a 2.684e-20
Complete
sp_v3.0_unigene209318 SustainPine v3.0 479
AutoFact: 60S ribosomal protein l27a n=2 Tax=Ictalurus punctatus RepID=E3TEN4_ICTPU 8.00001e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L27a 8.674e-16
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain