Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene129895 SustainPine v3.0 280
AutoFact: Ubiquitin n=1 Tax=Coccidioides posadasii str. Silveira RepID=E9DIZ1_COCPS 2.0e-40
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative Complete
sp_v3.0_unigene130672 SustainPine v3.0 324
AutoFact: Putative ubiquitin C variant 2 n=1 Tax=Taeniopygia guttata RepID=B5G2P2_TAEGU 7.00649e-44
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Ubiquitin, putative 1.697e-10
Putative Complete
sp_v3.0_unigene131577 SustainPine v3.0 213
AutoFact: polyubiquitin [Triticum aestivum] 2.0e-21
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
N-terminus
sp_v3.0_unigene132596 SustainPine v3.0 1008
AutoFact: polyubiquitin [Triticum aestivum] 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Bi-ubiquitin 1.803e-08
Complete
sp_v3.0_unigene137491 SustainPine v3.0 287
AutoFact: polyubiquitin [Triticum aestivum] 1.0e-37
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative Complete
sp_v3.0_unigene141332 SustainPine v3.0 400
AutoFact: ubiquitin [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Polyubiquitin 9.912e-08
Internal
sp_v3.0_unigene143725 SustainPine v3.0 890
AutoFact: Ubiquitin family protein [Tetrahymena thermophila] gb|EAR98252.1| Ubiquitin family protein [Tetrahymena thermophila SB210] 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative Complete
sp_v3.0_unigene143872 SustainPine v3.0 605
AutoFact: PREDICTED: similar to ubiquitin B precursor isoform 2 n=1 Tax=Canis lupus familiaris RepID=UPI00005A0BED 3.0e-14
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Internal
sp_v3.0_unigene145473 SustainPine v3.0 432
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative Complete
sp_v3.0_unigene146439 SustainPine v3.0 299
AutoFact: [O] COG5272 Ubiquitin 8.99634e-43
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Polyubiquitin 2.334e-10
Putative Complete
sp_v3.0_unigene146481 SustainPine v3.0 324
AutoFact: [O] COG5272 Ubiquitin 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Polyubiquitin 1.978e-10
Putative Complete
sp_v3.0_unigene146612 SustainPine v3.0 628
AutoFact: RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin; Flags: Precursor sp|P0CH05.1|UBI2P_PETCR RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin; Flags: Precursor emb|CAA45621.1| polyubiquitin [Petroselinum crispum] emb|CAA45622.1| 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Bi-ubiquitin 1.699e-08
Complete
sp_v3.0_unigene147425 SustainPine v3.0 283
AutoFact: ubiquitin [Musa acuminata AAA Group] 1.4013e-45
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Polyubiquitin 9.576e-08
Putative Complete
sp_v3.0_unigene147444 SustainPine v3.0 581
AutoFact: polyubiquitin [Pinus sylvestris] 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Bi-ubiquitin 1.79e-08
N-terminus
sp_v3.0_unigene147487 SustainPine v3.0 484
AutoFact: Polyubiquitin (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00Y36_OSTTA 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Bi-ubiquitin 1.738e-08
Putative Complete
sp_v3.0_unigene147488 SustainPine v3.0 124
AutoFact: [O] COG5272 Ubiquitin 1.0e-12
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative C-terminus
sp_v3.0_unigene147500 SustainPine v3.0 349
AutoFact: [O] COG5272 Ubiquitin 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Polyubiquitin 2.438e-10
Putative Complete
sp_v3.0_unigene147508 SustainPine v3.0 524
AutoFact: polyubiquitin [Elaeagnus umbellata] 3.9937e-43
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Polyubiquitin 9.687e-08
Complete
sp_v3.0_unigene147511 SustainPine v3.0 724
AutoFact: ubiquitin [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Bi-ubiquitin 1.725e-08
Putative Complete
sp_v3.0_unigene147533 SustainPine v3.0 729
AutoFact: Polyubiquitin (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00Y36_OSTTA 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Bi-ubiquitin 1.725e-08
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain