Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene72708 SustainPine v3.0 234
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 2.0e-24
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative N-terminus
sp_v3.0_unigene73488 SustainPine v3.0 373
AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Polyubiquitin-like protein 0.0
Putative Complete
sp_v3.0_unigene73986 SustainPine v3.0 358
AutoFact: Polyubiquitin (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00Y36_OSTTA 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Bi-ubiquitin 1.803e-08
Putative Complete
sp_v3.0_unigene73994 SustainPine v3.0 233
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 5.0e-26
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Ubiquitin, putative 3.877e-07
Internal
sp_v3.0_unigene74125 SustainPine v3.0 366
AutoFact: [O] COG5272 Ubiquitin 1.0e-39
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Polyubiquitin 9.576e-08
Putative Complete
sp_v3.0_unigene74175 SustainPine v3.0 100
AutoFact: Polyubiquitin (Fragment) n=3 Tax=core eudicotyledons RepID=A8J6W7_GLELI 3.0e-06
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative C-terminus
sp_v3.0_unigene75091 SustainPine v3.0 229
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 2.0e-33
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative Complete
sp_v3.0_unigene75259 SustainPine v3.0 231
AutoFact: [O] COG5272 Ubiquitin 4.0e-36
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Polyubiquitin 1.049e-07
Putative Complete
sp_v3.0_unigene75944 SustainPine v3.0 340
AutoFact: ubiquitin [Musa acuminata AAA Group] 2.0e-13
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative Complete
sp_v3.0_unigene77228 SustainPine v3.0 195
AutoFact: Polyubiquitin 12 n=5 Tax=Eukaryota RepID=UBQ12_ARATH 6.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Polyubiquitin 8.613e-08
Putative N-terminus
sp_v3.0_unigene79523 SustainPine v3.0 122
AutoFact: PREDICTED: polyubiquitin-like n=1 Tax=Pan troglodytes RepID=UPI00020E4C70 8.0e-12
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Ubiquitin, putative 8.301e-11
Putative C-terminus
sp_v3.0_unigene80048 SustainPine v3.0 149
AutoFact: polyubiquitin [Triticum aestivum] 3.0e-19
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Ubiquitin, putative 4.105e-07
Putative N-terminus
sp_v3.0_unigene80721 SustainPine v3.0 234
AutoFact: Ubiquitin family protein n=1 Tax=Trichinella spiralis RepID=E5RYQ3_TRISP 8.0e-35
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative Complete
sp_v3.0_unigene105382 SustainPine v3.0 186
AutoFact: [O] COG5272 Ubiquitin 6.0e-26
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
C-terminus
sp_v3.0_unigene127083 SustainPine v3.0 1023
AutoFact: ubiquitin [Antirrhinum majus] 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Polyubiquitin 0.0
Complete
sp_v3.0_unigene127165 SustainPine v3.0 957
AutoFact: RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin; Flags: Precursor sp|P0CH05.1|UBI2P_PETCR RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin; Flags: Precursor emb|CAA45621.1| polyubiquitin [Petroselinum crispum] emb|CAA45622.1| 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Bi-ubiquitin 1.803e-08
Putative Complete
sp_v3.0_unigene128507 SustainPine v3.0 354
AutoFact: polyubiquitin [Triticum aestivum] 2.0e-40
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative Complete
sp_v3.0_unigene128708 SustainPine v3.0 387
AutoFact: Ubiquitin n=1 Tax=Coccidioides posadasii str. Silveira RepID=E9DIZ1_COCPS 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative Complete
sp_v3.0_unigene129248 SustainPine v3.0 678
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Polyubiquitin 2.009e-10
N-terminus
sp_v3.0_unigene129421 SustainPine v3.0 211
AutoFact: Polyubiquitin n=2 Tax=Chlorophyta RepID=D8U995_VOLCA 1.0e-24
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain