Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene1532 SustainPine v3.0 1137
• AutoFact: 60S ribosomal protein L18-3 [Arabidopsis thaliana] sp|Q940B0.1|RL183_ARATH RecName: Full=60S ribosomal protein L18-3 gb|AAL07220.1| putative 60S ribosomal protein [Arabidopsis thaliana] gb|AAM67529.1| putative 60S ribosomal protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene22063 SustainPine v3.0 1019
• AutoFact: 60S ribosomal protein L18-3 [Arabidopsis thaliana] sp|Q940B0.1|RL183_ARATH RecName: Full=60S ribosomal protein L18-3 gb|AAL07220.1| putative 60S ribosomal protein [Arabidopsis thaliana] gb|AAM67529.1| putative 60S ribosomal protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Putative Complete
sp_v3.0_unigene25796 SustainPine v3.0 432
• AutoFact: Ribosomal protein L18 n=1 Tax=Ostreococcus tauri RepID=Q011F6_OSTTA 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 6.591e-31
Putative Complete
sp_v3.0_unigene27586 SustainPine v3.0 662
• AutoFact: Ribosomal protein L18 n=1 Tax=Monosiga brevicollis RepID=A9UXJ0_MONBE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 6.591e-31
Complete
sp_v3.0_unigene28377 SustainPine v3.0 628
• AutoFact: Ribosomal protein L18 n=1 Tax=Lineus viridis RepID=B0Z9M1_9BILA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 6.591e-31
Complete
sp_v3.0_unigene30821 SustainPine v3.0 704
• AutoFact: Ribosomal protein L18 n=1 Tax=Lineus viridis RepID=B0Z9M1_9BILA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 6.591e-31
Complete
sp_v3.0_unigene76818 SustainPine v3.0 234
• AutoFact: Chain R, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome pdb|3IZR|R Chain R, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Tra 4.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 6.591e-31
Internal
sp_v3.0_unigene79568 SustainPine v3.0 218
• AutoFact: Ribosomal protein L18 n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S2V6_OSTLU 3.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 1.971e-11
N-terminus
sp_v3.0_unigene127245 SustainPine v3.0 740
• AutoFact: 60S ribosomal protein L18-3 [Arabidopsis thaliana] sp|Q940B0.1|RL183_ARATH RecName: Full=60S ribosomal protein L18-3 gb|AAL07220.1| putative 60S ribosomal protein [Arabidopsis thaliana] gb|AAM67529.1| putative 60S ribosomal protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 1.349e-30
Putative C-terminus
sp_v3.0_unigene128035 SustainPine v3.0 853
• AutoFact: 60S ribosomal protein L18-2 [Arabidopsis thaliana] sp|P42791.2|RL182_ARATH RecName: Full=60S ribosomal protein L18-2 gb|AAF26138.1|AC011620_14 putative 60S ribosomal protein L18 [Arabidopsis thaliana] gb|AAK59824.1| AT3g05590/F18C1_14 [Arabidopsis thalian 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 1.349e-30
Complete
sp_v3.0_unigene150974 SustainPine v3.0 293
• AutoFact: Ribosomal protein L18 n=1 Tax=Ectocarpus siliculosus RepID=D7FML2_ECTSI 2.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 6.591e-31
N-terminus
sp_v3.0_unigene151224 SustainPine v3.0 428
• AutoFact: Ribosomal protein L18 n=1 Tax=Ectocarpus siliculosus RepID=D7FML2_ECTSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 6.591e-31
Complete
sp_v3.0_unigene151813 SustainPine v3.0 438
• AutoFact: Ribosomal protein L18 n=1 Tax=Ostreococcus tauri RepID=Q011F6_OSTTA 9.99995e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 6.591e-31
C-terminus
sp_v3.0_unigene154267 SustainPine v3.0 365
• AutoFact: Ribosomal protein L18 n=3 Tax=Blastocystis hominis RepID=D8M2N8_BLAHO 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 6.71e-14
C-terminus
sp_v3.0_unigene155283 SustainPine v3.0 223
• AutoFact: Ribosomal protein L18 n=1 Tax=Hister sp. APV-2005 RepID=Q4GXG8_9COLE 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 6.09e-35
N-terminus
sp_v3.0_unigene165349 SustainPine v3.0 429
• AutoFact: 60S ribosomal protein L18 n=2 Tax=Postia placenta Mad-698-R RepID=B8P3W3_POSPM 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 6.591e-31
Putative Complete
sp_v3.0_unigene166578 SustainPine v3.0 486
• AutoFact: 60S ribosomal protein L18 n=2 Tax=Postia placenta Mad-698-R RepID=B8P3W3_POSPM 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 6.591e-31
Putative N-terminus
sp_v3.0_unigene186559 SustainPine v3.0 552
• AutoFact: Ribosomal protein L18 n=1 Tax=Monosiga brevicollis RepID=A9UXJ0_MONBE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 1.349e-30
Putative Complete
sp_v3.0_unigene188866 SustainPine v3.0 552
• AutoFact: Ribosomal protein l18 n=1 Tax=Salpingoeca sp. ATCC 50818 RepID=F2UG10_9EUKA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 6.591e-31
Putative Complete
sp_v3.0_unigene190426 SustainPine v3.0 397
• AutoFact: Ribosomal protein l18 n=1 Tax=Salpingoeca sp. ATCC 50818 RepID=F2UG10_9EUKA 1.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L18 6.591e-31
N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain