Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein, partial [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene36896 SustainPine v3.0 4146
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TX75_VITVI 0.0
FL-Next: sp=DNA-directed RNA polymerase; Vitis vinifera (Grape). 0.0
Sma3: DNA-directed RNA polymerase 3.937e-22
Complete
sp_v3.0_unigene64772 SustainPine v3.0 222
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Populus trichocarpa RepID=B9GLY1_POPTR 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene154473 SustainPine v3.0 381
AutoFact: DNA-directed RNA polymerase I subunit RPA2 n=2 Tax=Rattus norvegicus RepID=RPA2_RAT 3.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene155384 SustainPine v3.0 247
AutoFact: DNA-directed RNA polymerase, beta subunit family protein [Tetrahymena thermophila] gb|EAR82894.1| DNA-directed RNA polymerase, beta subunit family protein [Tetrahymena thermophila SB210] 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-directed RNA polymerase 7.765e-15
Putative N-terminus
sp_v3.0_unigene162758 SustainPine v3.0 341
AutoFact: DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T5Q2_PHYPA 3.0e-30
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB2; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Internal
sp_v3.0_unigene167663 SustainPine v3.0 157
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TX75_VITVI 9.0e-10
FL-Next: sp=DNA-directed RNA polymerase; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene207719 SustainPine v3.0 724
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TX75_VITVI 4.0e-23
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain