Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene2280 SustainPine v3.0 611
• AutoFact: Contains similarity to gibberellin-stimulated transcript 1 like protein n=3 Tax=Arabidopsis RepID=Q8LFM2_ARATH 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GAST1 protein, putative 6.301e-09
Complete
sp_v3.0_unigene4523 SustainPine v3.0 1148
• AutoFact: GAST1 protein, putative n=1 Tax=Ricinus communis RepID=B9R733_RICCO 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene12414 SustainPine v3.0 1583
• AutoFact: GAST1 protein, putative n=1 Tax=Ricinus communis RepID=B9R733_RICCO 3.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Similar to gibberellin-regulated proteins 5.835e-09
Complete
sp_v3.0_unigene17695 SustainPine v3.0 705
• AutoFact: Gibberellin regulated protein n=1 Tax=Medicago truncatula RepID=Q2HRJ5_MEDTR 2.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene17763 SustainPine v3.0 636
• AutoFact: Gibberellin regulated protein n=1 Tax=Medicago truncatula RepID=Q2HRJ5_MEDTR 3.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Similarity to gibberellin-stimulated transcript 1 like protein 7.797e-06
Complete
sp_v3.0_unigene17980 SustainPine v3.0 705
• AutoFact: Gibberellin regulated protein n=1 Tax=Medicago truncatula RepID=Q2HRJ5_MEDTR 2.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene18008 SustainPine v3.0 702
• AutoFact: Gibberellin regulated protein n=1 Tax=Medicago truncatula RepID=Q2HRJ5_MEDTR 6.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene21055 SustainPine v3.0 671
• AutoFact: GAST1 protein, putative n=1 Tax=Ricinus communis RepID=B9R733_RICCO 7.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Similar to gibberellin-regulated proteins 5.965e-09
Complete
sp_v3.0_unigene21360 SustainPine v3.0 1004
• AutoFact: GAST1 protein, putative n=1 Tax=Ricinus communis RepID=B9R733_RICCO 1.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene21401 SustainPine v3.0 478
• AutoFact: GAST1 protein, putative n=1 Tax=Ricinus communis RepID=B9R733_RICCO 8.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GAST1 protein, putative 8.339e-09
Putative Complete
sp_v3.0_unigene21442 SustainPine v3.0 463
• AutoFact: GAST1 protein, putative n=1 Tax=Ricinus communis RepID=B9R733_RICCO 5.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene28124 SustainPine v3.0 688
• AutoFact: Contains similarity to gibberellin-stimulated transcript 1 like protein n=3 Tax=Arabidopsis RepID=Q8LFM2_ARATH 8.0e-20
• FL-Next: sp=Gibberellin-regulated protein 10; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene32781 SustainPine v3.0 708
• AutoFact: GAST1 protein, putative n=1 Tax=Ricinus communis RepID=B9R733_RICCO 8.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Similar to gibberellin-regulated proteins 6.229e-09
Complete
sp_v3.0_unigene33550 SustainPine v3.0 988
• AutoFact: Gibberellin regulated protein n=1 Tax=Medicago truncatula RepID=Q2HRJ5_MEDTR 4.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene36560 SustainPine v3.0 446
• AutoFact: Gibberellin regulated protein n=1 Tax=Medicago truncatula RepID=Q2HRJ5_MEDTR 1.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene36635 SustainPine v3.0 600
• AutoFact: Gibberellin regulated protein n=1 Tax=Medicago truncatula RepID=Q2HRJ5_MEDTR 1.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene56404 SustainPine v3.0 334
• AutoFact: Gibberellin regulated protein [Medicago truncatula] gb|ACJ86188.1| unknown [Medicago truncatula] 1.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene56772 SustainPine v3.0 375
• AutoFact: Gibberellin regulated protein n=1 Tax=Medicago truncatula RepID=Q2HRJ5_MEDTR 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene102181 SustainPine v3.0 1693
• AutoFact: GAST1 protein, putative n=1 Tax=Ricinus communis RepID=B9R733_RICCO 3.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Similar to gibberellin-regulated proteins 5.965e-09
Complete
sp_v3.0_unigene127244 SustainPine v3.0 625
• AutoFact: Gibberellin regulated protein n=1 Tax=Medicago truncatula RepID=Q2HRJ5_MEDTR 2.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain