Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: predicted protein, partial [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene24534 SustainPine v3.0 342
• AutoFact: 60S ribosomal protein L3 n=1 Tax=Phytophthora infestans T30-4 RepID=D0NY29_PHYIT 6.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 5.722e-14
C-terminus
sp_v3.0_unigene27406 SustainPine v3.0 462
• AutoFact: 60S ribosomal protein L3 putative n=1 Tax=Albugo laibachii Nc14 RepID=F0WE57_9STRA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 1.508e-17
C-terminus
sp_v3.0_unigene31917 SustainPine v3.0 635
• AutoFact: 60S ribosomal protein L3 putative n=1 Tax=Albugo laibachii Nc14 RepID=F0WE57_9STRA 5.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 1.053e-17
C-terminus
sp_v3.0_unigene31949 SustainPine v3.0 354
• AutoFact: PREDICTED: 60S ribosomal protein L3 [Apis mellifera] 7.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 6.539e-14
C-terminus
sp_v3.0_unigene55768 SustainPine v3.0 247
• AutoFact: ribosomal protein L3-A3 [Triticum aestivum] gb|ABK63943.1| ribosomal protein L3-A3 [Triticum aestivum] tpg|DAA01148.1| TPA_inf: ribosomal protein L3A-3 [Triticum aestivum] 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 5.831e-18
Internal
sp_v3.0_unigene62885 SustainPine v3.0 152
• AutoFact: Ribosomal protein L3-A2-II n=1 Tax=Triticum aestivum RepID=A1YE28_WHEAT 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene76486 SustainPine v3.0 329
• AutoFact: 60S ribosomal protein L3 (Fragment) n=12 Tax=Pinaceae RepID=O65076_PICMA 3.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L3 0.0
Putative C-terminus
sp_v3.0_unigene81292 SustainPine v3.0 177
• AutoFact: Probable RPL3-60s ribosomal protein l3 n=2 Tax=Ustilaginaceae RepID=E6ZMK2_9BASI 2.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 2.026e-11
Internal
sp_v3.0_unigene150096 SustainPine v3.0 274
• AutoFact: 60S ribosomal protein L3 n=1 Tax=Trichinella spiralis RepID=E5SJS8_TRISP 4.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 1.239e-17
Putative C-terminus
sp_v3.0_unigene150272 SustainPine v3.0 325
• AutoFact: Ribosomal protein L3 n=1 Tax=Ectocarpus siliculosus RepID=D7FHR5_ECTSI 5.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 1.479e-17
Putative C-terminus
sp_v3.0_unigene151509 SustainPine v3.0 386
• AutoFact: 60S ribosomal protein L3 n=45 Tax=Euteleostomi RepID=RL3_MOUSE 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 1.264e-17
Putative C-terminus
sp_v3.0_unigene151579 SustainPine v3.0 200
• AutoFact: PREDICTED: similar to ribosomal protein L3e n=1 Tax=Hydra magnipapillata RepID=UPI000192578D 1.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 1.793e-10
Internal
sp_v3.0_unigene151819 SustainPine v3.0 480
• AutoFact: Ribosomal protein L3 n=3 Tax=Polyphaga RepID=D1M828_9CUCU 5.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 1.239e-17
C-terminus
sp_v3.0_unigene152629 SustainPine v3.0 304
• AutoFact: Ribosomal protein L3e (Fragment) n=2 Tax=Neoptera RepID=Q4GXN8_9COLE 2.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 1.239e-17
Putative C-terminus
sp_v3.0_unigene152636 SustainPine v3.0 507
• AutoFact: 60S ribosomal protein L3, putative n=1 Tax=Pediculus humanus corporis RepID=E0VST1_PEDHC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 1.567e-17
C-terminus
sp_v3.0_unigene153715 SustainPine v3.0 283
• AutoFact: Ribosomal protein L3B n=1 Tax=Nicotiana tabacum RepID=Q6TKQ9_TOBAC 6.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 1.053e-17
C-terminus
sp_v3.0_unigene155948 SustainPine v3.0 461
• AutoFact: 60S ribosomal protein L3 n=4 Tax=Chromadorea RepID=RL3_TOXCA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 1.479e-17
C-terminus
sp_v3.0_unigene157173 SustainPine v3.0 330
• AutoFact: 60S ribosomal protein L3 putative n=1 Tax=Albugo laibachii Nc14 RepID=F0WE57_9STRA 6.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 1.451e-17
Internal
sp_v3.0_unigene157845 SustainPine v3.0 296
• AutoFact: Ribosomal protein L3, putative n=7 Tax=Trypanosoma RepID=C9ZM40_TRYB9 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 4.478e-14
Putative C-terminus
sp_v3.0_unigene158204 SustainPine v3.0 632
• AutoFact: PREDICTED: similar to ribosomal protein L3 n=1 Tax=Ciona intestinalis RepID=UPI000180CF92 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L3 2.824e-21
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain