Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: predicted protein, partial [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene23940 SustainPine v3.0 515
• AutoFact: 60S ribosomal protein L22, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0MSB0_PHYIT 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L22-2 1.999e-19
Complete
sp_v3.0_unigene26459 SustainPine v3.0 279
• AutoFact: Ribosomal protein L22 n=2 Tax=Branchiostoma RepID=Q8ISQ5_BRABE 5.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L22-2 7.501e-12
C-terminus
sp_v3.0_unigene151829 SustainPine v3.0 479
• AutoFact: 60S ribosomal protein L22, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0MSB0_PHYIT 8.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L22-2 2.526e-19
Putative Complete
sp_v3.0_unigene152510 SustainPine v3.0 214
• AutoFact: 60S ribosomal protein L22 n=1 Tax=Salpingoeca sp. ATCC 50818 RepID=F2TXD8_9EUKA 3.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene157811 SustainPine v3.0 370
• AutoFact: 60S ribosomal protein L22 [Xenopus (Silurana) tropicalis] ref|NP_001081541.1| 60S ribosomal protein L22 [Xenopus laevis] sp|P50886.2|RL22_XENLA RecName: Full=60S ribosomal protein L22 sp|Q28IL6.3|RL22_XENTR RecName: Full=60S ribosomal protein L22 emb|CAA6 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L22-2 3.246e-19
C-terminus
sp_v3.0_unigene158332 SustainPine v3.0 216
• AutoFact: 60S ribosomal protein L22 (Fragment) n=1 Tax=Brachionus plicatilis RepID=B7FDK7_BRAPC 3.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L22-2 2.989e-19
Putative C-terminus
sp_v3.0_unigene189285 SustainPine v3.0 451
• AutoFact: 60S ribosomal protein L22, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0MSB0_PHYIT 1.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L22-2 1.999e-19
Complete
sp_v3.0_unigene190598 SustainPine v3.0 396
• AutoFact: 60S ribosomal protein L22 (Fragment) n=1 Tax=Brachionus plicatilis RepID=B7FDK7_BRAPC 8.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L22-2 3.426e-19
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain