Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: predicted protein [Populus trichocarpa]

Source: Ref_annotation from RefSeq

Species: Populus trichocarpa


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene2317 SustainPine v3.0 1955
AutoFact: Pyruvate dehydrogenase, putative n=1 Tax=Ricinus communis RepID=B9S2H9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene28964 SustainPine v3.0 908
AutoFact: Pyruvate dehydrogenase alpha subunit n=1 Tax=Gossypium hirsutum RepID=D2D323_GOSHI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: PDHE1-A 3.203e-16
N-terminus
sp_v3.0_unigene52168 SustainPine v3.0 327
AutoFact: Pyruvate dehydrogenase alpha subunit n=1 Tax=Gossypium hirsutum RepID=D2D323_GOSHI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: PDHE1-A 3.065e-16
Internal
sp_v3.0_unigene80373 SustainPine v3.0 163
AutoFact: pyruvate dehydrogenase e1 component alpha subunit, mitochondrial precursor [Cryptococcus neoformans var. neoformans JEC21] ref|XP_774880.1| hypothetical protein CNBF0450 [Cryptococcus neoformans var. neoformans B-3501A] gb|EAL20233.1| hypothetical protein 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene130939 SustainPine v3.0 521
AutoFact: Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial n=3 Tax=Solanum RepID=ODPA_SOLTU 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: PDHE1-A 1.511e-16
C-terminus
sp_v3.0_unigene142011 SustainPine v3.0 184
AutoFact: RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial; Short=PDHE1-A; Flags: Precursor emb|CAA81558.1| E1 alpha subunit of pyruvate dehydrogenase precursor [Solanum tuberosum] 6.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: PDHE1-A 8.409e-17
Internal
sp_v3.0_unigene155419 SustainPine v3.0 266
AutoFact: PREDICTED: similar to pyruvate dehydrogenase (lipoamide) alpha 1 n=1 Tax=Ciona intestinalis RepID=UPI00006A63C6 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: PDHE1-A 3.277e-12
Internal
sp_v3.0_unigene158234 SustainPine v3.0 209
AutoFact: Pyruvate dehydrogenase (Acetyl-transferring) E1 component, alpha subunit n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XJT1_HIRBI 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: PDHE1-A 3.203e-16
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain